FC932351

Overview
NameFC932351
Unique NameFC932351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_CHLRE (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_130093 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.718e-39
Identity = 86/200 (43.00%), Postives = 101/200 (50.50%), Query Frame = 3
Query:  258 YELREIQTLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWE--QSASSRSWNC-------------------------------------------------KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 704
            + L  I  L GH DRVW++AW P   +       ASCSGDKTVRIW   Q   S  W C                                                 +GHENEVK V+WN  G L+ATCGRD+SVWIWE MPG EFECV V QGH+QDVK V WHP+ ++L S  YD+TIK+W     D D W C QT+
Sbjct:    4 FTLEPIGALSGHDDRVWNVAWSPQGDM------LASCSGDKTVRIWSRRQPRPSEQWYCSAILDQCHTRTIRSVAWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRLIATCGRDRSVWIWESMPGREFECVDVKQGHSQDVKAVTWHPSGELLVSAGYDDTIKLW---TYDGDEWGCAQTL 194          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_NEMVE (Probable cytosolic iron-sulfur protein assembly protein OS=Nematostella vectensis GN=v1g226592 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 81/190 (42.63%), Postives = 97/190 (51.05%), Query Frame = 3
Query:  282 LEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCK-------------------------------------------------GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 704
            + GH DRVWS+AW P   V       ASC GDKT+RIW +      W CK                                                 GHENEVKSV W+ SG+LLATCGRDKSVWIWEV   +E+EC SV+  H QDVK V WHPT ++L SCSYD+TIK++     D D+W C  T+
Sbjct:    1 MTGHEDRVWSVAWSPNGFV------LASCGGDKTIRIWGKEGDK--WICKTILEDGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLY---KEDEDDWSCCDTL 179          

HSP 2 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  237 EFLDDGNYELREIQTLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWE-VMPGNE-----------FECVSVLQG-HAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSD 680
            E  +D  YE   +  +  HT  V  + W PT        + ASCS D T++++++      W+C    +GHE+ V S+S++ SG  + +C  DK+V IW+   PGN+           ++CV VL G H + +  V W     ++ + S D+ I++ + EDT+SD
Sbjct:  122 EVQEDDEYECASV--IHSHTQDVKKVVWHPTK------EILASCSYDDTIKLYKEDEDD--WSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRI-FKEDTNSD 275          

HSP 3 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 38/130 (29.23%), Postives = 66/130 (50.77%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 656
            TLEGH + V S+ W  +        + A+C  DK+V IWE       + C      H  +VK V W+ +  +LA+C  D ++ +++    +++ C   L+GH   V  + +  + D + SCS D T+++W
Sbjct:   89 TLEGHENEVKSVDWSVSGS------LLATCGRDKSVWIWEVQEDD-EYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYK-EDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIW 210          

HSP 4 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 45/149 (30.20%), Postives = 68/149 (45.64%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQ-----------SASSRSWNCKG-----HENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNE-----FECVSVLQ-GHAQDVKMVQWHPTMD-VLFSCSYDNTIKVW 656
            TLEGH   VWS+++      D       SCS DKTVRIW+            S     W C       H+  +  V W+    L+AT   D  + I++    ++     F+ V+  +  H+ DV  + WHP  + +L +CS D T+K+W
Sbjct:  178 TLEGHESTVWSISF------DGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPS (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila pseudoobscura pseudoobscura GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 83/192 (43.23%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCK-------------------------------------------------GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +R+W  S S  +W+ K                                                 GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT D+L S SYDNTIK++     DSD W C  T+S
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRVW--SLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSD-WDCTATLS 191          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila persimilis GN=Ciao1 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 83/192 (43.23%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCK-------------------------------------------------GHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +R+W  S S  +W+ K                                                 GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT D+L S SYDNTIK++     DSD W C  T+S
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRVW--SLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSD-WDCTATLS 191          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 84/190 (44.21%), Postives = 98/190 (51.58%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQ-------------------------------------------SASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +RIW                                             S SS  + C    +GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT DVL S SYDNTIK++  E  D+D W C  T++
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDND-WDCTATLT 191          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 84/190 (44.21%), Postives = 98/190 (51.58%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQ-------------------------------------------SASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +RIW                                             S SS  + C    +GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT DVL S SYDNTIK++  E  D+D W C  T++
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDND-WDCTATLT 191          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROER (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 83/190 (43.68%), Postives = 99/190 (52.11%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQ-------------------------------------------SASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +RIW                                             S SS  + C    +GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT +VL S SYDNTIK+ +AED   ++W C  T++
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKM-YAEDPVDNDWDCTATLT 191          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROAN (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 84/190 (44.21%), Postives = 99/190 (52.11%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQ-------------------------------------------SASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +RIW                                             S SS  + C    +GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT ++L S SYDNTIK+ +AED    +W CV T+S
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKM-FAEDALDSDWDCVATLS 191          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROME (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.396e-35
Identity = 83/190 (43.68%), Postives = 98/190 (51.58%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQ-------------------------------------------SASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +RIW                                             S SS  + C    +GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT D+L S SYDNTIK++  E  D+D W C  T++
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDND-WDCTATLT 191          
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: CIAO1_DROYA (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 82/190 (43.16%), Postives = 98/190 (51.58%), Query Frame = 3
Query:  279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQ-------------------------------------------SASSRSWNC----KGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTIS 707
            TL+GH  R+W +AW P   V      FASC  DK +RIW                                             S SS  + C    +GHENEVKSVSW+ SG LLATC RDKSVWIWEV   +EFEC +VL  H QDVK V WHPT ++L S SYDNTIK++  E  D+D W C  T++
Sbjct:    9 TLQGHKGRIWGVAWHPKGNV------FASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPIDND-WDCTATLT 191          
The following BLAST results are available for this feature:
BLAST of FC932351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CIAO1_CHLRE2.718e-3943.00Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_NEMVE5.668e-3742.63Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROPS3.674e-3643.23Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROPE3.674e-3643.23Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROSI1.069e-3544.21Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROSE1.069e-3544.21Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROER1.069e-3543.68Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROAN1.069e-3544.21Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROME1.396e-3543.68Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROYA1.823e-3543.16Probable cytosolic iron-sulfur protein assembly pr... [more]

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Properties
Property NameValue
Genbank descriptionC34207F10EF PostHarveN Citrus clementina cDNA clone C34207F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932351 ID=FC932351; Name=FC932351; organism=Citrus clementina; type=EST; length=736bp
GCCGGGGGACGAAACAAACCACAAGCACCCGTAATTACCGCACCCGATTC
GAAAGGTCCGAGCGCGTGCCATTCCCAAGCTTCTGGTTTTAAACTTTATT
CTAGTCCCTCGGCAGCGTTGGCTGCTCACTGTTTGTTGTTACCAATCAAC
CTAAACAGCGAGCTAGTTAGCTACTTTTGATCATCCAAAAGGAACAGTTA
AATCGATCATTAACGTTATTTACAGTTCGTTCAATGGAGTTTCTGGATGA
CGGAAATTATGAGCTGAGAGAGATTCAAACACTCGAAGGCCATACCGACA
GAGTCTGGAGCCTCGCTTGGAAGCCGACCGCCGGCGTCGACAGTGTTGCG
CCGGTCTTTGCTTCCTGTAGTGGTGATAAGACCGTACGAATCTGGGAGCA
GAGCGCCTCCTCTCGCTCTTGGAATTGCAAGGGTCATGAAAATGAAGTAA
AAAGTGTGTCTTGGAATGCATCTGGTACTTTGCTTGCAACATGTGGTCGA
GACAAATCTGTTTGGATTTGGGAAGTAATGCCAGGAAATGAATTTGAGTG
TGTTTCAGTGTTGCAAGGACACGCGCAAGATGTGAAAATGGTTCAATGGC
ATCCAACCATGGATGTCTTATTTTCTTGTAGCTATGATAACACTATTAAG
GTCTGGTGGGCAGAGGATACTGATAGTGATAATTGGCATTGTGTTCAAAC
CATAAGTGAATCTAACATGGTCACTCTTCTACCATT
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