FC932363

Overview
NameFC932363
Unique NameFC932363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length773
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15493 contig Ccv1_Contig15493:1..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GALK1_ARATH (Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=2 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 2.907e-83
Identity = 138/197 (70.05%), Postives = 163/197 (82.74%), Query Frame = 1
Query:   61 MARHEEAPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKELRNL 651
            MA+ EE  VP   SL+ VYGEGS L+EA  RF  LK+ F  VFG +P ++ARSPGRVNLIGEHIDYEGYSVLPMAIRQDTI+AIRK    E +K L+IAN +DKY++CTYPA+PDQE+DLK+H+WGHYFIC YKGF+EY K+KG+++G PVGLD+LVDGIVPTGSGLSSSAAFVCS+TIA+MA FG    KKEL  L
Sbjct:    1 MAKPEEVSVPIFTSLEPVYGEGSLLQEATQRFDVLKANFNDVFGASPQLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIIAIRKC---EDQKQLRIANVNDKYTMCTYPADPDQEIDLKNHKWGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIAIMAVFGHNFEKKELAQL 194          

HSP 2 Score: 47.7506 bits (112), Expect = 2.907e-83
Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 3
Query:  630 KERIAQLTCECERYIGAQSGGMDQA 704
            K+ +AQLTCECER+IG QSGGMDQA
Sbjct:  188 KKELAQLTCECERHIGTQSGGMDQA 212          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GALK2_RAT (N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.070e-28
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 1
Query:  151 RFGNLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKELRNL 651
            R   LK  F   FG  P  Y R+PGRVN+IGEHIDY GYSVLPMA+ QD ++A    V     + L++AN    Y   +  A  +  +D     W +YF+CG+KG  E+    GL   P  G++ LVDG +P  SGLSSS+A VC + +  +   G+ + K EL  +
Sbjct:   18 RLLKLKEMFNSKFGSTPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIA----VGPVKTQTLQLANTDPLYPDFSTTAN-NICIDKTQPLWHNYFLCGFKGIQEHF---GLTQLP--GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMRLSKVELAEI 174          

HSP 2 Score: 31.5722 bits (70), Expect = 1.070e-28
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  630 KERIAQLTCECERYIGAQSGGMDQA 704
            K  +A++  + ERYIG + GGMDQ+
Sbjct:  168 KVELAEICAKSERYIGTEGGGMDQS 192          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GALK2_PONAB (N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.393e-28
Identity = 67/167 (40.12%), Postives = 91/167 (54.49%), Query Frame = 1
Query:  151 RFGNLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKELRNL 651
            R   LK  F   FG  P  Y R+PGRVN+IGEHIDY GYSVLPMA+ QD ++A    V       L++AN +  Y   +  A  + ++D     W +YF+CG KG  E+     L      G++ LVDG +P  SGLSSS+A VC + +  +   G  + K EL  +
Sbjct:   18 RLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIA----VEPVKTYTLQLANTNPLYPDLSTSAN-NIQIDKTKPLWHNYFLCGLKGIQEHFGVSNL-----TGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEI 174          

HSP 2 Score: 31.5722 bits (70), Expect = 1.393e-28
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  630 KERIAQLTCECERYIGAQSGGMDQA 704
            K  +A++  + ERYIG + GGMDQ+
Sbjct:  168 KVELAEICAKSERYIGTEGGGMDQS 192          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_SCHPO (Galactokinase OS=Schizosaccharomyces pombe GN=gal1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.810e-28
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 1
Query:   79 APVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQ-ELDLKHHQWGHYFICGYKGFYEYVKAKGLDV-----GPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKE 639
            A VPT   L       S  +E + R+  L + F Q +   PD ++RSPGRVN+IGEHIDY  +SVLPMAI  D IV++    S +A+  L   N   K  +   P++    E++  HH WG+YF C     ++Y+  K  ++      P  GL ++ DG VPTG GLSSSAAF  +S +A++ A G+    KE
Sbjct:    2 ATVPTYHDLSFY----SNPKENKARYAKLLNSFEQKYHCKPDFFSRSPGRVNIIGEHIDYNYFSVLPMAIDVDVIVSVT--TSDDAKVELNNTNPEFKEEILELPSDGAVIEINKTHHTWGNYFRCSMIVAHKYILEKYPELVSGGKKPLKGLKLIFDGNVPTGGGLSSSAAFCVASILAILKANGINTITKE 188          

HSP 2 Score: 28.1054 bits (61), Expect = 1.810e-28
Identity = 10/26 (38.46%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  630 KERIAQLTCECERYIGAQSGGMDQAS 707
            KE + +++   E Y+G  +GGMDQ +
Sbjct:  187 KEDLVKISVVSEHYVGVNTGGMDQCA 212          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GALK2_HUMAN (N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.361e-28
Identity = 67/167 (40.12%), Postives = 91/167 (54.49%), Query Frame = 1
Query:  151 RFGNLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKELRNL 651
            R   LK  F   FG  P  Y R+PGRVN+IGEHIDY GYSVLPMA+ QD ++A    V       L++AN +  Y   +  A  + ++D     W +YF+CG KG  E+     L      G++ LVDG +P  SGLSSS+A VC + +  +   G  + K EL  +
Sbjct:   18 RLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIA----VEPVKTYALQLANTNPLYPDFSTSAN-NIQIDKTKPLWHNYFLCGLKGIQEHFGLSNL-----TGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEI 174          

HSP 2 Score: 31.5722 bits (70), Expect = 2.361e-28
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  630 KERIAQLTCECERYIGAQSGGMDQA 704
            K  +A++  + ERYIG + GGMDQ+
Sbjct:  168 KVELAEICAKSERYIGTEGGGMDQS 192          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GALK2_MOUSE (N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.074e-28
Identity = 68/167 (40.72%), Postives = 93/167 (55.69%), Query Frame = 1
Query:  151 RFGNLKSKFIQVFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKELRNL 651
            R   LK  F   FG  P  Y R+PGRVN+IGEHIDY GYSV+PMA+ QD ++A    V       L++AN    Y   +  A  +  +D     W +YF+CG+KG  E+    GL   P  G++ LVDG +P  SGLSSS+A VC + +  +   G+ + K EL  +
Sbjct:   18 RLLKLKEMFNSKFGSTPKFYVRAPGRVNIIGEHIDYCGYSVIPMAVEQDMLIA----VEPVKTHTLQLANTDPLYPDFSTTAN-NICIDKTKPLWHNYFLCGFKGIQEHF---GLSKLP--GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGLRLSKVELAEI 174          

HSP 2 Score: 31.5722 bits (70), Expect = 3.074e-28
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  630 KERIAQLTCECERYIGAQSGGMDQA 704
            K  +A++  + ERYIG + GGMDQ+
Sbjct:  168 KVELAEICAKSERYIGTEGGGMDQS 192          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GALK_DICDI (Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25
Identity = 70/191 (36.65%), Postives = 109/191 (57.07%), Query Frame = 1
Query:  100 SLKEVYGEGSQLEEAQLRFGNLKSKFIQVF-GHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAE--PDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKELRNLHVNA 663
            SL ++Y      E  + R+  L   F +++ G  P  Y R+PGRVNLIGEH+DY GY VLP A+ QDTIVA+  +       ++ I N ++KY+  +       D E+D+K H W +Y +  +KG  + ++ KG   G    +++L  G VP G+G+SSS+A VC ST+A+     + + K+EL  L + +
Sbjct:   14 SLDDIY---KNFENNKKRYEELNETFSKIYNGDKPIFYFRAPGRVNLIGEHVDYSGYCVLPFALEQDTIVAVSFNKLN--NDIINIHNCNEKYTPKSIDVSGGGDIEIDMKRHHWTNYVLAAWKGVSQAME-KG---GKLKSVNLLYSGNVPMGAGVSSSSALVCVSTLAISYCNNLILNKEELAQLSIKS 195          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_CANAL (Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.817e-24
Identity = 79/196 (40.31%), Postives = 110/196 (56.12%), Query Frame = 1
Query:   85 VPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQVFGHAP-DVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQ---ELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGV-EVPKKELRNLHV 657
            VPT   L   Y    +L ++  R+  L   F   F +A  D +ARSPGRVNLIG+HIDY  + VLPMAI  D IVA+  +V+ E E V+   + S  ++  T P   +    E+D +HH W +YF C       Y+  + L  G   G+ +  DG VPTG GLSSSAAF  +ST+A++ A GV ++ K +L  + V
Sbjct:    3 VPTFDDLS-FYSNDQELTKS--RYLKLVEIFQSNFPNASIDFFARSPGRVNLIGDHIDYNFFPVLPMAISADVIVAV--NVNDEPEIVITHTD-SKNFAKETIPLTNNNDGFEIDSQHHSWANYFKCALIVANNYLTEQNLK-GQLKGMKLTFDGNVPTGGGLSSSAAFCVASTLAILHANGVKDITKADLTRITV 191          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_CANMA (Galactokinase (Fragment) OS=Candida maltosa GN=GAL1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.741e-23
Identity = 70/179 (39.11%), Postives = 101/179 (56.42%), Query Frame = 1
Query:  127 SQLEEAQLRFGNLKSKFIQVF-GHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANFSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGV-EVPKKELRNLHV 657
            S +E  Q RF  +   F   F G     +ARSPGRVNLIG+HIDY  + VLPMAI  D I A+  + + E    + I N   K  L    A  + ++D +HH W +YF C      +Y++ +G  V    G+ +  +G VPTG GLSSSAAF  +ST+A++ A G+ ++ K++L  + V
Sbjct:   13 SNVEPNQQRFTEVVKTFQTNFPGDDITFFARSPGRVNLIGDHIDYNFFPVLPMAIANDVIAAVNVNSTNE----IIITNTDSKDFLKEVIALRNSQIDQEHHSWANYFKCALIVAKQYLEERG--VTSLKGMKLTFNGNVPTGGGLSSSAAFCVASTLAIIRANGITDLTKQDLTRITV 185          
BLAST of FC932363 vs. ExPASy Swiss-Prot
Match: GAL1_CANPA (Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.474e-22
Identity = 69/172 (40.12%), Postives = 98/172 (56.98%), Query Frame = 1
Query:  151 RFGNLKSKFIQVFGHAP-DVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGEAEKVLKIANF-SDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVE-VPKKELRNLHV 657
            R+ NL   F   + +   + +ARSPGRVNLIG+HIDY  + VLPMAI  D + A    VS     ++ IAN  S K+   T     +  +D +HH W +YF CG     ++++ K +      G++I   G VPTG GLSSSAAF  +ST+A++ A GVE + K +L  + V
Sbjct:   21 RYANLVKTFKSKYPNDEIEFFARSPGRVNLIGDHIDYNYFPVLPMAIEVDVVAA----VSTNNNDMIVIANTDSAKFPKETVSLAEEFTIDREHHTWANYFKCGLIVASKFLQEKAMT--KLKGMNITFSGTVPTGGGLSSSAAFCVASTLAVLYANGVEDISKADLTRITV 186          
The following BLAST results are available for this feature:
BLAST of FC932363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
GALK1_ARATH2.907e-8370.05Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=2... [more]
GALK2_RAT1.070e-2841.32N-acetylgalactosamine kinase OS=Rattus norvegicus ... [more]
GALK2_PONAB1.393e-2840.12N-acetylgalactosamine kinase OS=Pongo abelii GN=GA... [more]
GAL1_SCHPO1.810e-2839.38Galactokinase OS=Schizosaccharomyces pombe GN=gal1... [more]
GALK2_HUMAN2.361e-2840.12N-acetylgalactosamine kinase OS=Homo sapiens GN=GA... [more]
GALK2_MOUSE3.074e-2840.72N-acetylgalactosamine kinase OS=Mus musculus GN=Ga... [more]
GALK_DICDI2.430e-2536.65Galactokinase OS=Dictyostelium discoideum GN=galK ... [more]
GAL1_CANAL7.817e-2440.31Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=... [more]
GAL1_CANMA1.741e-2339.11Galactokinase (Fragment) OS=Candida maltosa GN=GAL... [more]
GAL1_CANPA1.474e-2240.12Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC34207G10EF PostHarveN Citrus clementina cDNA clone C34207G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932363 ID=FC932363; Name=FC932363; organism=Citrus clementina; type=EST; length=773bp
GGTGAAGAGAATCGTATAGAGGCAATTGAGTTGAGGGAATTAAAATCAAA
ATCGGAAAAAATGGCGAGGCACGAAGAAGCACCAGTTCCTACATTGGCGT
CATTGAAGGAAGTGTACGGAGAAGGATCACAACTGGAAGAGGCTCAACTT
CGTTTCGGTAACTTGAAGTCTAAGTTCATTCAAGTCTTCGGTCACGCTCC
CGATGTGTACGCTCGATCCCCAGGAAGAGTGAACTTGATTGGGGAGCATA
TTGATTATGAAGGATATTCTGTATTGCCAATGGCAATTCGACAAGATACA
ATTGTGGCGATACGGAAGCATGTTTCAGGAGAGGCTGAAAAGGTTCTTAA
AATAGCTAATTTTAGTGACAAGTACAGTTTGTGTACTTATCCTGCTGAAC
CTGATCAGGAACTTGACTTGAAGCATCATCAATGGGGCCATTATTTCATT
TGTGGATATAAAGGTTTTTATGAATATGTGAAAGCTAAAGGATTGGATGT
TGGTCCACCAGTTGGACTTGATATTCTTGTTGATGGAATAGTTCCAACAG
GTTCTGGGCTATCCAGCTCTGCAGCATTTGTTTGCTCTTCGACCATTGCT
CTTATGGCTGCTTTTGGTGTGGAAGTCCCAAAGAAAGAATTGCGCAACTT
ACATGTGAATGCGAACGATATATTGGAGCGCAGTCTGGTGGAATGGACCA
GGCATCTCTATCATGGCCAATCTGGGTTGCAGACTGATGATTTCATCCAT
TCGTGCACTGATGTGCACTTCCT
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