FC932407

Overview
NameFC932407
Unique NameFC932407
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932407 vs. ExPASy Swiss-Prot
Match: DBNBT_TAXCA (3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase OS=Taxus canadensis GN=TAX10 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 1
Query:  190 KISVQPVWDRATLLGPRHPPRAE---------GPVLEFLGTEKGSKPYSHDVGPVVRQCFDVADECLDGLKDALFDECGMKFTTFEAFGAFVWRAKVRCSGISGDKNVKFAYPSNIRRTVKPPLPLGYWGNGCIPLYAQLSAKELVEQPLWKTAELIKKSKSNTNDEYVRS 675
            K S++P+W+R  LL P  P   +          P+LE LG                +  F +  + ++ +K  + +EC    ++FE   A VW A+ +   I   +NVK  +  ++R+   PPLP GY+GN     YA  + ++L+   L +   +IKK+K++  D Y RS
Sbjct:  187 KPSLEPIWNRE-LLNPEDPLHLQLNQFDSICPPPMLEELG----------------QASFVINVDTIEYMKQCVMEECNEFCSSFEVVAALVWIARTKALQIPHTENVKLLFAMDLRKLFNPPLPNGYYGNAIGTAYAMDNVQDLLNGSLLRAIMIIKKAKADLKDNYSRS 340          
BLAST of FC932407 vs. ExPASy Swiss-Prot
Match: T5AT_TAXCU (Taxadien-5-alpha-ol O-acetyltransferase OS=Taxus cuspidata GN=TAT PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 45/160 (28.12%), Postives = 80/160 (50.00%), Query Frame = 1
Query:  190 KISVQPVWDRATLLGPRHPPRAEGP-VLEFLGTEKGSKPYSHDVGPVVRQCFDVADECLDGLKDALFDECGMKFTTFEAFGAFVWRAKVRCSGISGDKNVKFAYPSNIRRTVKPPLPLGYWGNGCIPLYAQLSAKELVEQPLWKTAELIKKSKSNTNDEY 666
            K+S++P+W+R  +       + + P  L+F   E    P    V  +V+  F +  E ++ +K ++ +EC    ++FE   A  W A+ R   I   + VK  +  ++R +  PPLP GY+GN      A  + ++L+   L +   +IKKSK + ND +
Sbjct:  188 KLSLEPIWNRELV-------KLDDPKYLQFFHFEFLRAPSI--VEKIVQTYFIIDFETINYIKQSVMEECKEFCSSFEVASAMTWIARTRAFQIPESEYVKILFGMDMRNSFNPPLPSGYYGNSIGTACAVDNVQDLLSGSLLRAIMIIKKSKVSLNDNF 338          
BLAST of FC932407 vs. ExPASy Swiss-Prot
Match: T5AT_TAXCH (Taxadien-5-alpha-ol O-acetyltransferase OS=Taxus chinensis PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 45/160 (28.12%), Postives = 80/160 (50.00%), Query Frame = 1
Query:  190 KISVQPVWDRATLLGPRHPPRAEGP-VLEFLGTEKGSKPYSHDVGPVVRQCFDVADECLDGLKDALFDECGMKFTTFEAFGAFVWRAKVRCSGISGDKNVKFAYPSNIRRTVKPPLPLGYWGNGCIPLYAQLSAKELVEQPLWKTAELIKKSKSNTNDEY 666
            K+S++P+W+R  +       + + P  L+F   E    P    V  +V+  F +  E ++ +K ++ +EC    ++FE   A  W A+ R   I   + VK  +  ++R +  PPLP GY+GN      A  + ++L+   L +   +IKKSK + ND +
Sbjct:  188 KLSLEPIWNRELV-------KLDDPKYLQFFHFEFLRAPSI--VEKIVQTYFIIDFETINYIKQSVMEECKEFCSSFEVASAMTWIARTRAFQIPESEYVKILFGMDMRNSFNPPLPSGYYGNSIGTACAVDNVQDLLSGSLLRAIMIIKKSKVSLNDNF 338          
The following BLAST results are available for this feature:
BLAST of FC932407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
DBNBT_TAXCA4.964e-1428.653'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase ... [more]
T5AT_TAXCU2.306e-1128.13Taxadien-5-alpha-ol O-acetyltransferase OS=Taxus c... [more]
T5AT_TAXCH2.306e-1128.13Taxadien-5-alpha-ol O-acetyltransferase OS=Taxus c... [more]
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Properties
Property NameValue
Genbank descriptionC34208C07EF PostHarveN Citrus clementina cDNA clone C34208C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932407 ID=FC932407; Name=FC932407; organism=Citrus clementina; type=EST; length=719bp
GCAAACCGAAATACCCAGAAAAATCGAATCGAAAGCCAGCATAAGGAGAG
AATGGAAGTAAAAATCATAGAAACAAAGCAAATACTGCCCTCAACACCAC
CCTTCAAAGATGAGGGGGAACACGAACTCCCTCTCTCCCACCTCGACAAC
GACCCCAACATCCGCTCCTTCATCATTCTATGTGCGACTAAAATTTCCGT
CCAACCGGTTTGGGACCGGGCGACTTTGTTGGGTCCGAGACATCCGCCCC
GGGCTGAAGGTCCGGTTCTTGAGTTTTTGGGTACCGAGAAAGGGTCCAAA
CCCTACTCCCACGACGTTGGACCGGTTGTTAGGCAGTGCTTTGATGTCGC
AGATGAGTGTTTGGATGGGTTGAAGGATGCGTTGTTTGATGAGTGTGGGA
TGAAATTTACGACGTTTGAGGCTTTCGGCGCGTTCGTTTGGCGAGCCAAG
GTGAGATGCTCGGGAATTTCTGGCGATAAGAATGTGAAGTTTGCATACCC
GTCCAATATACGTAGAACAGTAAAGCCACCGCTACCACTTGGCTATTGGG
GAAATGGATGCATACCACTGTATGCCCAGCTGAGTGCCAAAGAACTTGTG
GAGCAACCCCTTTGGAAAACCGCTGAGCTGATTAAGAAGAGCAAAAGCAA
TACCAATGACGAGTACGTGCGCTCGTTTATTGACTTTCAGGAGCTTTATT
ACGAAGACGGCATTACAGC
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