FC932433

Overview
NameFC932433
Unique NameFC932433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.400e-96
Identity = 168/243 (69.14%), Postives = 203/243 (83.54%), Query Frame = 2
Query:    2 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNI-KESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARKFTGHKNG 727
            DQFDD DE EK+ KSSFFNWFYF IN+GA+IASSVLVWIQ N GWGWG G+P VAMAIAVV FF+G+  +R QKPGGSPLTR+ QV+ AS RK KV++P D+SLLYE  DAES+I GSRKL+HTK  +FFDKAAVE +SDN      + W+LCTVTQVEELKA++RLLPIWATGI+F++VYSQM ++FVLQG  +D H+G  +FKIP ASLS+FDTLSV+FW P+YD++IVP ARK+TGH+ G
Sbjct:  166 DQFDDTDEKEKESKSSFFNWFYFVINVGAMIASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASCRKSKVKIPEDESLLYENQDAESSIIGSRKLEHTKILTFFDKAAVETESDNKGAAKSSSWKLCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMG-PNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERG 407          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.466e-95
Identity = 167/243 (68.72%), Postives = 203/243 (83.54%), Query Frame = 2
Query:    2 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKE-SVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARKFTGHKNG 727
            DQFD+ DE EK  KSSFFNWFYFSIN+GALIA++VLVWIQ N GWGWGFG+P VAM IAV  FF G+R +R Q+PGGSPLTRI QV+ A+ RK  V++P DKSLL+ETAD ESNI GSRKL HT +  FFDKAAVE QSD+IK+  VNPWRLC+VTQVEELK+I+ LLP+WATGI+F+ VYSQMS++FVLQG  MD H+G  +F+IP ASLS+FDT+SV+FW P+YD+ I+P+ARKFT ++ G
Sbjct:  166 DQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKISVKVPEDKSLLFETADDESNIKGSRKLVHTDNLKFFDKAAVESQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMG-KNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERG 407          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.490e-85
Identity = 153/243 (62.96%), Postives = 187/243 (76.95%), Query Frame = 2
Query:    2 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIK-ESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARKFTGHKNG 727
            DQFDD D  E+  K+SFFNWFYFSINIGAL++SS+LVWIQ+N GWG GFGIP V M +A+ SFF GT L+R QKPGGSP+TRI QVV AS RK  V++P D +LLYET D  S I GSRK++HT D  + DKAAV  + ++   +  N WRLCTVTQVEELK ++R+ PIWA+GIIFSAVY+QMS++FV QG  M+  +G  SF++PPA+L  FDT SVI WVP+YDR IVP+ARKFTG   G
Sbjct:  184 DQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQVVVASFRKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIG--SFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKG 424          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.513e-53
Identity = 106/247 (42.91%), Postives = 163/247 (65.99%), Query Frame = 2
Query:    2 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETAD---AESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESV-NPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARKFTGHKNGL 730
            DQFD+ +  E+   + FFN F+F IN+G+L+A +VLV++QD+ G  WG+GI A A+ +A+  F +GT  +R +K  GSP+T++  V+ A+ R  K+ELPAD S LY+  D   AE ++ G +KL HT+ F   DKAA+  Q   +  +V N W L T+T VEE+K IVR+LPIWAT I+F  V++Q+++L V Q E +D  +G  SF+IPPAS+++F    ++    +YDR+ + + +K   + +GL
Sbjct:  173 DQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIVAAWRNRKLELPADPSYLYDVDDIIAAEGSMKGKQKLPHTEQFRSLDKAAIRDQEAGVTSNVFNKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIG--SFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGL 417          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.249e-48
Identity = 98/243 (40.33%), Postives = 148/243 (60.91%), Query Frame = 2
Query:    2 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARKFTGHKNGL 730
            DQFD  D  EK  K SFFNW+ FSI  G L A++VLV++QDN GW  G+G+P + +AI++  F  GT  +R++ P GSP T++ +V+ AS RK    +  D +  +E    E    G+  +  T    F D+A+++  ++      + W LCT T+VEE K ++R+LP+     + S + +Q+++LFV QG  +D  V   SF IPPASLS F TLS++  + +YDR+ V + RKFTG+  G+
Sbjct:  173 DQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARVIVASFRKANAPMTHDITSFHELPSLEYERKGAFPIHPTPSLRFLDRASLKTGTN------HKWNLCTTTEVEETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKV-TGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGI 408          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.744e-46
Identity = 93/243 (38.27%), Postives = 148/243 (60.91%), Query Frame = 2
Query:    2 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARKFTGHKNGL 730
            DQFD+ D  +K HK SFFNW+ FSI  G   A++VLV++QDN GW  G+G+  + +A ++  F  GTRL+R++ P GSP T++ +V+ AS+RK +  + +D +  YE    E     +  +  T    F ++A+++        S + WRLCT+T+VEE K ++++LP+     + S + +Q+ +LF+ QG  +D  + N +F IPPASL  F T S++  + IYDR+ V   RK TG+  G+
Sbjct:  173 DQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVGWAIGYGLSTLGLAFSIFIFLLGTRLYRHKLPMGSPFTKMARVIVASLRKAREPMSSDSTRFYELPPMEYASKRAFPIHSTSSLRFLNRASLK------TGSTHKWRLCTITEVEETKQMLKMLPVLFVTFVPSMMLAQIMTLFIKQGTTLDRRLTN-NFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPRGI 408          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.761e-36
Identity = 89/244 (36.48%), Postives = 134/244 (54.92%), Query Frame = 2
Query:    2 DQFDDADEAEKKHK-SSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADK---SLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVG--NSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARKFTG 715
            DQ D+ +  + +    SFF W+Y S  +  LIA + +V+IQ++ GW  GFG+PAV M IA + F   + L+  +    S  T + Q + A+ +K K+ LP         Y   D+E     S+KL              EI SD    ++NPWRLCT  +VEELKA+++++PIW+TGI+ S   SQ SS  +LQ   MD  +    SSF++P  S  +F  +++  WV +YDR ++P+A K  G
Sbjct:  168 DQLDNKENPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLYVTRGVTKSLFTGLAQAIVAAYKKRKLSLPDHHDSFDCYYHMKDSEIK-APSQKLRFLNKACLISNREEEIGSDGF--ALNPWRLCTTDKVEELKALIKVIPIWSTGIMMSINTSQ-SSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRG 407          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21
Identity = 59/223 (26.46%), Postives = 112/223 (50.22%), Query Frame = 2
Query:   50 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMD----THVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARK 706
            FFNWFY+SIN+GA+++   + +IQ N  +  G+ IP V + +A V F  G  +F  + P GS  T + +++  S    K            + + +SN  G      +   S FD   +       +E           +VE++KA+V+++P++   I +  VY QM + +VLQ   +     +++  +   +P A L++FD + ++  +P+ D+++ P+ R+
Sbjct:  194 FFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCSQK-----------RSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEE-----------KVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRR 394          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 57/223 (25.56%), Postives = 108/223 (48.43%), Query Frame = 2
Query:   50 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMD----THVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARK 706
            FFNWFY+SIN+GA+++   + +IQ N  +  G+ IPAV + +A V F  G   F  + P GS  T + +++  S R  K              +   +  G      +   S FD   +       ++           +VE++KA+V+++P++   I +  VY QM + +VLQ   +     + +  +    P A L++FD + ++  +P+ D+++ P+ ++
Sbjct:  187 FFNWFYWSINLGAIVSLGGIAYIQQNVSFVTGYAIPAVCIGVAFVVFLCGQTFFITKPPDGSAFTDMFRILVYSCRPQK-----------RIREHSPSGEGIGVFQQSSKHSLFDSCKMSRGGPFPED-----------KVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTNPHTFPAAWLTMFDAVLILLLIPLKDKLVDPILKR 387          
BLAST of FC932433 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18
Identity = 62/222 (27.93%), Postives = 113/222 (50.90%), Query Frame = 2
Query:   50 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVA--ASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMD-THVGNSSFKIPPASLSIFDTLSVIFWVPIYDRIIVPVARK 706
            FFNWFY+SIN+GA+I+   + ++Q N  +  G+ IPAV + ++ + F  G  +F  +   GS  T + +++A     RKH  E          T + ++N        H    S  D A              P+R     +VE++KA+V+++P++   I +  VY QM + +VLQ   +    + N++  +P A L++FD + ++  +P+ D+++ P  +K
Sbjct:  201 FFNWFYWSINLGAIISLGGVAYVQQNVEFLIGYIIPAVCIGVSFLVFLCGKTVFVTKPADGSAFTDMVKILAYFCCSRKHTRE---------NTRNIQNN-------QHRHKQSRLDMAKA--------SHGGPFR---EDKVEDVKALVKIIPVFLALIPYWTVYFQMQTTYVLQSLHLRIPQIFNNNHTLPAAWLTMFDAVLILILIPLKDKLVDPFLKK 395          
The following BLAST results are available for this feature:
BLAST of FC932433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PTR5_ARATH2.400e-9669.14Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH3.466e-9568.72Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR2_ARATH2.490e-8562.96Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
CHL1_ARATH2.513e-5342.91Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR3A_ARATH9.249e-4840.33Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR3B_ARATH1.744e-4638.27Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR2X_ARATH4.761e-3636.48Probable peptide transporter At1g52190 OS=Arabidop... [more]
S15A4_HUMAN9.638e-2126.46Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
S15A4_BOVIN3.100e-1925.56Solute carrier family 15 member 4 OS=Bos taurus GN... [more]
S15A4_XENLA4.477e-1827.93Solute carrier family 15 member 4 OS=Xenopus laevi... [more]

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Properties
Property NameValue
Genbank descriptionC34208E09EF PostHarveN Citrus clementina cDNA clone C34208E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932433 ID=FC932433; Name=FC932433; organism=Citrus clementina; type=EST; length=730bp
AGATCAGTTTGATGATGCTGATGAAGCTGAGAAAAAGCACAAGAGCTCTT
TCTTCAACTGGTTTTATTTTTCAATCAATATAGGCGCTCTTATTGCTTCT
TCCGTACTTGTCTGGATACAAGATAATGAGGGTTGGGGATGGGGATTTGG
CATTCCTGCTGTCGCAATGGCAATTGCCGTCGTAAGTTTCTTTTCAGGTA
CTCGATTGTTCAGGAACCAAAAGCCTGGAGGCAGCCCTCTCACACGCATC
TGTCAGGTGGTGGCGGCATCCATAAGGAAACACAAAGTTGAACTACCTGC
TGATAAGTCTCTTTTATATGAGACTGCTGATGCTGAGTCTAACATCACAG
GTAGCCGCAAGCTTGATCACACGAAAGATTTCAGTTTCTTCGACAAGGCA
GCAGTAGAGATACAATCAGACAACATAAAGGAGTCCGTAAACCCGTGGAG
ACTCTGCACTGTTACCCAAGTTGAGGAGCTGAAAGCTATCGTAAGGTTGC
TTCCAATATGGGCCACTGGCATAATCTTTTCTGCCGTGTACAGTCAGATG
AGCAGTTTATTTGTGTTGCAAGGTGAAAGAATGGACACTCATGTTGGGAA
CTCTAGCTTCAAGATCCCACCAGCATCGCTGTCTATATTTGACACTCTCA
GTGTCATCTTTTGGGTCCCTATCTATGACAGAATCATTGTCCCAGTCGCA
AGGAAATTCACAGGTCACAAAAATGGCCTA
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