FC932454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18B_SCHPO (60S ribosomal protein L18-B OS=Schizosaccharomyces pombe GN=rpl18b PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.658e-49 Identity = 101/168 (60.12%), Postives = 117/168 (69.64%), Query Frame = 1 Query: 43 MGIDLDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISEAQXXXXXXXXXXXX---DDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFGPHTDKKPYVAS 537 MGID++RHHVR S R P S+NVYLK+LVKLYRFLARRT+S FNKA+L+RLF S+ NRPP+S+S+ A S DD RLLTVPKLS+ I KAGGE LTLDQLALRAPTG+NT+LLRG K+AREA +HFGFGPH K PYV S Sbjct: 1 MGIDIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFGPHKHKAPYVRS 168
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18A_SCHPO (60S ribosomal protein L18-A OS=Schizosaccharomyces pombe GN=rpl18a PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.770e-48 Identity = 99/168 (58.93%), Postives = 118/168 (70.24%), Query Frame = 1 Query: 43 MGIDLDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISE---AQXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFGPHTDKKPYVAS 537 MGID++RHHV+ S R P S+NVYLK+LVKLYRFLARRT+S FNKA+L+RLF S+ NRPP+S+S+ A S + DD R+LTVPKLSI I KAGGE LTLDQLALRAPTG+NT+L+RG K+AREA +HFGFGPH K PYV S Sbjct: 1 MGIDIERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFGPHKHKAPYVRS 168
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18_YEAST (60S ribosomal protein L18 OS=Saccharomyces cerevisiae GN=RPL18A PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42 Identity = 92/167 (55.09%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 43 MGID-LDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSR-AVANISEAQXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFGPHTDKKPYVAS 537 MGID + H RS HR APKSDNVYLK+LVKLY FLARRT++ FNK VL+ LF+S+INRPPVS+SR A A E DD R+ PK ++ I KAGGE +TLDQLA+RAP G NTL+LRGP+N+REAV+HFG GPH K P + S Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKAPRILS 167
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18_TIMBA (60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37 Identity = 84/169 (49.70%), Postives = 110/169 (65.09%), Query Frame = 1 Query: 43 MGIDLDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISE-AQXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFG---PHTDKKPYVAS 537 MGID++ + R R PKS +VYL++LVKLYR+LARRT + FNK +L+RLFMS+I RPP+SLS+ V + + + DD+R+ +PKLSI I KAGGE +T DQLALR+PTG+ T+LL+G +NAREAVKHFG PH+ KP V S Sbjct: 1 MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRPPISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRS 169
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37 Identity = 87/167 (52.10%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 43 MGIDLDRH-HVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISEAQXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFG---PHTDKKPYV 531 MGIDL + + R APKSD+VYLK+LVKLYRFL RR+ SNFN +L+RLFMS++N+ P+SLSR V + DD R+ +P + + IEKAGGE LT DQLALRAP G NT+LLRGPKN+REAVKHFG PH++ KPYV Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLV-EFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYV 166
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18_DROME (60S ribosomal protein L18 OS=Drosophila melanogaster GN=RpL18 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.341e-37 Identity = 86/169 (50.89%), Postives = 104/169 (61.54%), Query Frame = 1 Query: 43 MGIDLDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISEA-QXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFG---PHTDKKPYVAS 537 MGID++ + R R PKS +VYL++LVKLYRFL RRT FN+ +L+RLFMS+INRPP+SL R A Q DD RLL VPKL++ I KAGGE LT DQLALR+PTG NTLLL+G + AR A KHFG PH+ +PYV S Sbjct: 1 MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRS 169
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18_SPOFR (60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.554e-36 Identity = 86/167 (51.50%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 43 MGIDLDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISE-AQXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFG---FGPHTDKKPYV 531 MGID++ H R R KS +VYL++LVKLYR+LARRT S FN +LRRLFMSRINRPP+SLSR ++ + + +D RL VPK+S+ I AGGE LT DQLALRAPTGA T+LL+G +NAREAV+HFG P + KPYV Sbjct: 1 MGIDINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRPPLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGEILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYV 167
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18_PLUXY (60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36 Identity = 84/169 (49.70%), Postives = 107/169 (63.31%), Query Frame = 1 Query: 43 MGIDLDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISE-AQXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFG---FGPHTDKKPYVAS 537 MGID++ H R R KS +VYL++LVKLYR+LARRT + FN+ VLRRLFMSRINRPP+SLSR ++ + + +D RL VPK+++ I AGGE LT DQLALRAPTG T+L++G +NAREAV+HFG P + KPYV S Sbjct: 1 MGIDINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPLSLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGEILTFDQLALRAPTGRKTVLIQGQRNAREAVRHFGPAPGAPRSHTKPYVRS 169
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL18_DROPS (60S ribosomal protein L18 OS=Drosophila pseudoobscura pseudoobscura GN=RpL18 PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 1 Query: 46 GIDLDRHHVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISEA-QXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFG---PHTDKKPYVAS 537 GID++ + R R PKS +VYL++LVKLYRFL RRT FN+ +L+RLFMS+INRPP+SL R A Q DD RLL VPKL++ I KAGGE LT DQLAL++PTG NTLLL+G + AR A KHFG PH+ +PYV S Sbjct: 3 GIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQRIARFFKAANQPESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEVLTFDQLALKSPTGKNTLLLQGKRTARTACKHFGKAPGVPHSHTRPYVRS 170
BLAST of FC932454 vs. ExPASy Swiss-Prot
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 86/167 (51.50%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 43 MGIDLDRH-HVRSSHRKAPKSDNVYLKVLVKLYRFLARRTESNFNKAVLRRLFMSRINRPPVSLSRAVANISEAQXXXXXXXXXXXXDDNRLLTVPKLSIXXXXXXXXXXXXIEKAGGETLTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFG---PHTDKKPYV 531 MGIDL + + R APKSD+VYLK+ VKLYRFL RRT S FN +L+RLFMS++N+ P+SLSR V ++ + DD R+ +P + + IEKAGGE LT DQLALRAP G NT+LLRGPKN+REAVKHFG PH+ KPYV Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMT-GKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYV 166 The following BLAST results are available for this feature:
BLAST of FC932454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932454 ID=FC932454; Name=FC932454; organism=Citrus clementina; type=EST; length=706bpback to top |