FC932507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932507 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36 Identity = 76/148 (51.35%), Postives = 107/148 (72.30%), Query Frame = 2 Query: 269 YDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNLE--EIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSR--TANWRDTL 700 YD+ E++AFDDTKAGVKGLVD+GI +P+IF+ PP++ ++ +H F PVIDL G+ + ++ EIVD+VR A+E WGFFQVVNHGIP +VL+ ++G +F E D E+KK++YTRD + V + SN DL+ S A+WRDT+ Sbjct: 10 YDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPPKDRAKKCETH---FVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTI 154
BLAST of FC932507 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36 Identity = 75/149 (50.34%), Postives = 102/149 (68.46%), Query Frame = 2 Query: 260 VTDYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNL--EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTL 700 V DR+ ++AFD+TK GVKGL+DAGI IP IF PP L ++F +P IDL G +++ +V+++ AAE WGFFQV+NHGIP++VLE+MI+GI +F+E D E+KK FY+RD + ++SNFDL S ANWRDTL Sbjct: 8 VAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTL 156
BLAST of FC932507 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.907e-34 Identity = 71/148 (47.97%), Postives = 105/148 (70.95%), Query Frame = 2 Query: 266 DYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNL--EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLT 703 +YDRA E++AFD+ K GVKGLVDAG+ +PRIF P + + T +P IDL GV + + E +V +V+ A E +GFFQ +NHG+PL+V+E+MI GI +F++ D E++K FYTRD+T+ ++++SN DL+ S A+WRDTL+ Sbjct: 4 NYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPT-STVVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLS 150
BLAST of FC932507 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31 Identity = 65/152 (42.76%), Postives = 111/152 (73.03%), Query Frame = 2 Query: 257 TVTDYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVE-ELTSHQTNFQVPVIDLDGVRGNN--LEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQ-TRNVRFNSNFDLHYSRTANWRDTL 700 T+++ + +E++AFD+TKAGVKG+VD GI IPRIFI P+ L + +++ ++PVI+L+G+ N+ EIV+++ A+E +GFFQ+VNHGIP +V+++M++G+ KF+E D ++K+++Y+RD+ +N ++SN+ L NWRDT+ Sbjct: 35 TLSEEESLRELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRISVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTM 186
BLAST of FC932507 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31 Identity = 71/157 (45.22%), Postives = 102/157 (64.97%), Query Frame = 2 Query: 269 YDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRP------PEELVEELTSHQTNFQVPVIDL------DGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLT 703 +DRA E++AFD+TK GVKGLVD+G+ +PRIF P P+ L +L +T +P IDL D ++ NN +++++ AA WGFFQV+NHG+ L +LE+M +G+ F+E E++KEFY+RD +R + SNFDL S ANWRDT + Sbjct: 10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKT---IPTIDLGGRDFQDAIKRNNA---IEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFS 160
BLAST of FC932507 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 68/159 (42.77%), Postives = 100/159 (62.89%), Query Frame = 2 Query: 248 TTQTVTDYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIF------IRPPEELVEELTSHQTNFQVPVIDLDGVRGNNL---EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDT 697 +T+ +DRA E++AFD+TK GVKGLVD+GI IPRIF + P+ L +L +T +P IDL G + + ++ ++ AA WGFFQV+NHG+ L +LE+M +G+ F+E E++K+ Y+RD R + SNFDL+ + ANWRDT Sbjct: 3 STKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKT---IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDT 158 The following BLAST results are available for this feature:
BLAST of FC932507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932507 ID=FC932507; Name=FC932507; organism=Citrus clementina; type=EST; length=713bpback to top |