FC932516

Overview
NameFC932516
Unique NameFC932516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA4_ARATH (Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.637e-79
Identity = 146/215 (67.91%), Postives = 167/215 (77.67%), Query Frame = 3
Query:   87 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRR-----DEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDRESE 716
            MTKKAVLIGINYPGTKAEL+GCVNDV+RMY CLV+RYGFSEENITVLIDTD+ STQPTG+NIRRAL +LV SA+ GDVL VHYSGHGTRLPA            CIVP DMNLITDDDFR+ VD++PPGC +T++SDSCHSGGLIDEAKEQIGEST++     DE EES S F F+ FL  KVE A ESRG HI    +    +  E++E +E E
Sbjct:    1 MTKKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGKNIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDFRDLVDKVPPGCRMTIISDSCHSGGLIDEAKEQIGESTKKEAEDEDESEESSSRFGFRKFLRSKVEGAIESRGFHIGGNKKDEDEA--EEIETKEIE 213          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA5_ARATH (Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.227e-70
Identity = 133/205 (64.88%), Postives = 158/205 (77.07%), Query Frame = 3
Query:   87 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESG--SGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDED 695
            M KKAVLIGINYPGTKAEL+GCVNDV+R++  LVDR+GFSE NIT LIDTD+ ST+PTG+NIRRAL NLV SA+PGDVL VHYSGHGTRLPA            CIVP DMNLITDD+FR+ V+++P    IT++SDSCHSGGLIDEAKEQIGEST++  ++ESG  SG   K F+ + VE A ES+GI IP    HH+   DE+
Sbjct:    1 MAKKAVLIGINYPGTKAELRGCVNDVRRVHKSLVDRFGFSERNITELIDTDESSTKPTGKNIRRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDMNLITDDEFRDLVEKVPKEAHITIISDSCHSGGLIDEAKEQIGESTKKKPKKESGGSSGLGIKGFVREAVEEALESKGIAIP----HHKDEKDEN 201          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA7_ARATH (Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61
Identity = 123/213 (57.75%), Postives = 147/213 (69.01%), Query Frame = 3
Query:   87 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTR---RDEEEESGSGFNFKSFLHKKVENAFESRGI---HIPSGLRHHRPSGDEDVEDR 707
            M K+A+LIGINYPGT  EL+GCVNDV RM+ CLVDR+GF+EE+ITVLIDTD+  TQPTG+NIR+AL  L++ A+ GDVLFVHYSGHGTR+P             CIVPSD+N I DDDFR+ V+Q+P GC+IT+VSDSCHSGGLIDEAKEQIGEST      E + S   F FK+ LH          GI   H+ +        GDE V  R
Sbjct:    1 MAKRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTDESYTQPTGKNIRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDLNPIPDDDFRDLVEQVPEGCQITIVSDSCHSGGLIDEAKEQIGESTTTKPNRESKVSSFEFEFKNCLHSIFVKLLAFCGIGSSHVETREIVEVGEGDEVVRSR 213          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA6_ARATH (Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61
Identity = 114/169 (67.46%), Postives = 132/169 (78.11%), Query Frame = 3
Query:   87 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFN 593
            M KKA+LIGINY GTKAEL+GCVNDV+RM   LV+RYGFSEENI +LIDTD  S +PTG+NIR+AL +LV  A+ GDVLFVHYSGHGTRLPA            CIVPSDMNLITDDDFR+ VD +P  C IT++SDSCHSGGLIDEAKEQIGEST++ ++    S  N
Sbjct:    1 MAKKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDSSSIKPTGKNIRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFRDLVDMVPKDCPITIISDSCHSGGLIDEAKEQIGESTKKKKDSGDSSTIN 169          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA8_ARATH (Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.519e-47
Identity = 89/156 (57.05%), Postives = 108/156 (69.23%), Query Frame = 3
Query:   87 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRL-PAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGES 551
            M KKA+LIGINYPGT  EL+GCVNDV RM  CL++ YGF+ ++I ++IDTD    QPTG+NI   L NL+ S + GD L  HYSGHGTR+ P             CI P DMNLI D  FRE V ++  GC++T++SDSCHSGGLI E KEQIGES
Sbjct:    1 MAKKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDKSCIQPTGKNICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQFREMVSRVKEGCQLTIISDSCHSGGLIQEVKEQIGES 156          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA9_ARATH (Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.655e-39
Identity = 83/164 (50.61%), Postives = 108/164 (65.85%), Query Frame = 3
Query:   75 EENKMTKK--AVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPG--DVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGEST 554
            ++  M KK  AVL+G NYP T+ EL GC+NDV  M   ++ R+GF +++I VL D  +   +PTG NI+ AL  +V  A+ G  D+LF HYSGHGTR+P+             IVP D NLITD DFRE V+Q+P G   T++SDSCHSGGLID+ KEQIG S+
Sbjct:    2 DQQGMVKKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPESKVKPTGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDE-AIVPCDFNLITDVDFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQIGPSS 164          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPOR (Metacaspase-1A OS=Aspergillus oryzae GN=casA PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.413e-24
Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 3
Query:   90 TKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 524
            T+KA+LIGINY   K +L+GC+NDVK M   L + +G+  EN+ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V+ + PG  +T + DSCHSG  +D
Sbjct:  105 TRKALLIGINYFNQKGQLRGCINDVKNMSTYLHENFGYPRENMVLLTDDQQNPKSQPTKANILRAMHWLVKDAKPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRQAGHIVDDEMHRIMVNPLQPGVRLTAIFDSCHSGSALD 253          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA1_PICST (Metacaspase-1 OS=Pichia stipitis GN=MCA1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.116e-24
Identity = 63/149 (42.28%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   93 KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLI-DTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 524
            KKA+L+G+NY G+  EL+GC+NDVK M + LVD +G+   +I +L  D +D S  PT  NI RA+  LV+ A P D L  HYSGHG    A             I P D     +++ DD     V  +PPGC +T + DSCHSG  +D
Sbjct:  109 KKALLVGVNYFGSPNELRGCINDVKNMSSFLVDHWGYQWNDIVILTDDQNDISRVPTKNNIIRAMQWLVKDARPNDSLVFHYSGHG-GTTADTDGDEESGYDDVIYPVDFQQAGHIVDDDMHAIMVRPLPPGCRLTALYDSCHSGTALD 256          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA1_EMENI (Metacaspase-1 OS=Emericella nidulans GN=casA PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   93 KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 524
            +KA+LIGINY G K +L+GC+NDVK M   L   +G++ E++ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V  + PG  +T + DSCHSG  +D
Sbjct:  111 RKALLIGINYFGQKGQLRGCINDVKNMSTYLNQNFGYAREDMVILTDDQQNPMSQPTKANILRAMHWLVKDAQPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRVAGHIVDDEMHRIMVKPLQPGVRLTAIFDSCHSGSALD 258          
BLAST of FC932516 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPTN (Metacaspase-1A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=casA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 3
Query:   93 KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 524
            +KA+LIGINY G K +L+GC+NDVK M   L   +G++ E++ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V+ + PG  +T + DSCHSG  +D
Sbjct:  110 RKALLIGINYFGQKGQLRGCINDVKNMSTYLNQNFGYAREDMVLLTDDQQNPMSQPTKANILRAMHWLVKDAQPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRVAGHIVDDEMHRIMVNPLKPGTRLTAIFDSCHSGSALD 257          
The following BLAST results are available for this feature:
BLAST of FC932516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
MCA4_ARATH7.637e-7967.91Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1... [more]
MCA5_ARATH2.227e-7064.88Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1... [more]
MCA7_ARATH1.108e-6157.75Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1... [more]
MCA6_ARATH9.379e-6167.46Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1... [more]
MCA8_ARATH4.519e-4757.05Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1... [more]
MCA9_ARATH2.655e-3950.61Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1... [more]
MCA1A_ASPOR2.413e-2440.67Metacaspase-1A OS=Aspergillus oryzae GN=casA PE=3 ... [more]
MCA1_PICST4.116e-2442.28Metacaspase-1 OS=Pichia stipitis GN=MCA1 PE=3 SV=1[more]
MCA1_EMENI7.021e-2440.27Metacaspase-1 OS=Emericella nidulans GN=casA PE=2 ... [more]
MCA1A_ASPTN7.021e-2440.27Metacaspase-1A OS=Aspergillus terreus (strain NIH ... [more]

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Properties
Property NameValue
Genbank descriptionC34209D11EF PostHarveN Citrus clementina cDNA clone C34209D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932516 ID=FC932516; Name=FC932516; organism=Citrus clementina; type=EST; length=725bp
GATTCAAGTAGATCAGATCAAATCCAACACTCGAGATCCAAAAGAAAGAA
ACGTTTCTTTCGAGATTATCAGAAGAGGAAAACAAAATGACGAAAAAAGC
GGTGTTAATAGGCATAAACTACCCGGGAACGAAAGCGGAGCTGAAGGGGT
GCGTTAACGACGTTAAACGGATGTATGCATGTTTGGTGGATCGTTACGGA
TTCTCGGAGGAGAACATAACGGTGTTGATCGATACGGATGATAGGTCTAC
CCAGCCGACTGGGCGGAATATTAGGAGGGCTTTGGGCAATTTGGTGCGAT
CGGCTGAGCCCGGTGACGTGCTGTTTGTTCACTACAGCGGGCATGGGACC
AGGCTTCCTGCTGAGACTGGGGAGGACGACGATACTGGTTATGATGAGTG
CATTGTTCCTTCTGATATGAATCTTATTACTGATGATGATTTCAGGGAGT
TTGTAGACCAAATCCCACCAGGTTGTGAGATAACAGTTGTGTCTGATTCT
TGCCATAGTGGTGGCCTTATTGATGAGGCTAAGGAACAGATTGGGGAGAG
CACAAGGCGTGATGAAGAGGAAGAATCTGGTTCTGGTTTTAACTTCAAAA
GCTTCTTGCACAAGAAAGTGGAAAATGCATTTGAATCTCGTGGAATTCAC
ATTCCTTCTGGGCTGCGCCATCACCGCCCTAGTGGTGATGAAGATGTTGA
AGATCGTGAAAGTGAAGCCGGATAT
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