FC932529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VP282_ARATH (Vacuolar protein sorting-associated protein 28 homolog 2 OS=Arabidopsis thaliana GN=VPS28-2 PE=1 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 4.004e-64 Identity = 126/177 (71.19%), Postives = 139/177 (78.53%), Query Frame = 2 Query: 191 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTK*RTGFQXV-KMGA 718 MEVKLWNDKREREMYENFAEL+AIIKATEKLEKAY+RD+I+ SEYE+ECQKLI HFKTLS+TLKD VP+IERFADTYKMDCPAAL RLVTSG+PATVEHR ECVQNFIT+MDSLKLNMVAVDQV+P +ILPPDFEGKTK + + KMGA Sbjct: 2 MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSATLKDTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQNFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGA 178
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VP281_ARATH (Vacuolar protein sorting-associated protein 28 homolog 1 OS=Arabidopsis thaliana GN=VPS28-1 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.552e-63 Identity = 125/177 (70.62%), Postives = 138/177 (77.97%), Query Frame = 2 Query: 191 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTK*RTG-FQXVKMGA 718 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAY+RD+IS SEYETECQKLI HFKTLS++LKD+VP+IERFA+TYKMDC AA+ RLVTSGVPATVEHR ECVQNFIT+MDSLKLNMVAVDQV+P +ILPPDFEGK K + + KMGA Sbjct: 1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGA 177
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_DICDI (Vacuolar protein sorting-associated protein 28 OS=Dictyostelium discoideum GN=vps28 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 76/163 (46.63%), Postives = 98/163 (60.12%), Query Frame = 2 Query: 194 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTK 682 EVKL+N+ EREMYEN AELY+IIK TE LEKAY+RD +S +Y T C KLIA FK+ + LKD V ++ +F Y ++C AA +RLV G P+T+EH E VQ FIT MDS++L +V+VD ++P L P FEGK K Sbjct: 84 EVKLFNNNIEREMYENLAELYSIIKVTEHLEKAYIRDDVSPKDYTTACSKLIAQFKSSQTLLKDQVSNVGQFMKDYDLNCKAAFDRLVIKGFPSTLEHNTNESSTDSAMAKNVAEAVQLFITTMDSIRLKLVSVDGIYPLLSDLMESLNKNQWLGPTFEGKEK 246
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_HUMAN (Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens GN=VPS28 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22 Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 194 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLK-DIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGK 676 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D +S SEY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ Sbjct: 23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIK------DDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGR 177
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_DROME (Vacuolar protein sorting-associated protein 28 homolog OS=Drosophila melanogaster GN=Vps28 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 59/164 (35.98%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 194 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLK-DIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTK 682 EVKL+ + RERE Y+N A+LYAII ++LEKAY+RD I+ EY C K + +K ++ D PS+E F +++DCPAAL R + P T+ E V FIT MD L+L + +D + P +++P DF+ K K Sbjct: 11 EVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALER-IREDRPITIR------DDKGNTSKCIAEIVSLFITIMDKLRLQINTMDALQPDVKDLADNMNRLSLIPEDFDAKLK 167
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_RAT (Vacuolar protein sorting-associated protein 28 homolog OS=Rattus norvegicus GN=Vps28 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 194 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLK-DIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGK 676 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D ++ +EY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ Sbjct: 30 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIK------DDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGR 184
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_MOUSE (Vacuolar protein sorting-associated protein 28 homolog OS=Mus musculus GN=Vps28 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 194 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLK-DIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGK 676 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D ++ +EY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ Sbjct: 23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIK------DDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGR 177
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_BOVIN (Vacuolar protein sorting-associated protein 28 homolog OS=Bos taurus GN=VPS28 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 194 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLK-DIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGK 676 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D ++ +EY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ Sbjct: 23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIK------DDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGR 177
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_CAEEL (Vacuolar protein sorting-associated protein 28 homolog OS=Caenorhabditis elegans GN=Y87G2A.10 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 56/143 (39.16%), Postives = 82/143 (57.34%), Query Frame = 2 Query: 182 NTPMEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHP 610 N EV+L+ + ERE EN +EL+A++ A E LEK + RD +S+ EY++EC KLI +K ++ L SIE FA Y++ CPAA+ R + G P TV+ V+ FIT +D+L+LN AVD ++P Sbjct: 7 NLMREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVSADEYKSECFKLIDQYK-VTMRLVHGATSIEDFAKKYRLHCPAAIER-IREGRPITVK------DDQGNVLKHIASIVEQFITFLDALRLNTRAVDDLYP 141
BLAST of FC932529 vs. ExPASy Swiss-Prot
Match: VPS28_YEAST (Vacuolar protein sorting-associated protein 28 OS=Saccharomyces cerevisiae GN=VPS28 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14 Identity = 60/192 (31.25%), Postives = 88/192 (45.83%), Query Frame = 2 Query: 161 INRLIHLNTPMEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKT-LSSTLKDIV----PSIERFADTYKMDCPAALNRLVTSGVPATVEH-------------RXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTK 682 I++L H P+ K ++E+ E +E+Y+I+ + +EKAY++D I ++Y KL+ FK L+S K+ + SIE F DTY + A+ RL G+P T EH + E NFIT MD+LKLN A DQ+HP T DFE ++K Sbjct: 14 ISQLFHDEVPLFDNSITSK-DKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFCDTYNITASNAITRL-ERGIPITAEHAISTTTSAPSGDNKQSSSSDKKFNAKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVT--RDDFENRSK 201 The following BLAST results are available for this feature:
BLAST of FC932529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932529 ID=FC932529; Name=FC932529; organism=Citrus clementina; type=EST; length=719bpback to top |