FC932552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.785e-51 Identity = 98/162 (60.49%), Postives = 122/162 (75.31%), Query Frame = 1 Query: 151 MGANVSGIIAD-SNGDELSSLRPRLSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCNPSPFDGGNK-MWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYLHK 630 MGAN+SG + D++ S + RL D+PE+CVAL++ LDPPEIC+LARLNR FR ASSADFIWESKLP+NY+ I KV + T ++ KK LYA+L P+ FD G K +W+DKNTG LC+SISSKAL ITGIDDRRYW+HI T+ESRFQS AY+ + Sbjct: 1 MGANISGGSPEFDRNDDVYSRKLRLVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITLTKLI----KKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDESRFQSAAYVQQ 158 HSP 2 Score: 30.4166 bits (67), Expect = 2.785e-51 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 627 QIWWFEVDGEFE 662 QIWWFEV GEFE Sbjct: 158 QIWWFEVGGEFE 169
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 6.433e-44 Identity = 80/142 (56.34%), Postives = 108/142 (76.06%), Query Frame = 1 Query: 208 LRPRLSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCNPSPFDGG-NKMWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYLHK 630 L+P L D+PE+CVA+++ +LDP EIC+ ++LNRAFRGAS AD +WESKLP NY+ +++K+LG + L K+HLYA L + FD K+W+DK T G+C+SIS+K L+ITGIDDRRYW+HI T+ESRF SVAYL + Sbjct: 24 LKPGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG-----GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIPTDESRFSSVAYLQQ 160 HSP 2 Score: 29.6462 bits (65), Expect = 6.433e-44 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 627 QIWWFEVDGEFE 662 QIWWFEVDGE + Sbjct: 160 QIWWFEVDGEID 171
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.619e-42 Identity = 79/142 (55.63%), Postives = 106/142 (74.65%), Query Frame = 1 Query: 208 LRPRLSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCNPSPFDGGN-KMWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYLHK 630 L+P L D+PESCVAL+L +LDP EIC+ ++LN AF GAS ADF+WESKLP +Y+ I++K+LGS D L K+ ++ L + FD GN K W+DK TGGLC+ S+K L+ITGIDDRRYW+HI +++SRF SVAY+ + Sbjct: 22 LQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILGS-----FPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQ 158 HSP 2 Score: 28.4906 bits (62), Expect = 2.619e-42 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 627 QIWWFEVDGEFE 662 QIWWF+VDGE + Sbjct: 158 QIWWFQVDGEID 169
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.842e-40 Identity = 81/161 (50.31%), Postives = 111/161 (68.94%), Query Frame = 1 Query: 151 MGANVSGIIADSNGDELSSLRPRLSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCNPSPFDGGNK-MWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYLHK 630 MG+++S + +NG ++ P L D+PESCVA V M+L PPEIC LA LNR+FRGA+S+D +WE KLP NYQ ++D + LSKK ++A L P PFD NK +W+D+ TG +C++IS++ ++ITGI+DRRYW I TEESRF VAYL + Sbjct: 1 MGSSLSNLNDGTNG---LAMGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLL-----PPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEESRFHVVAYLQQ 153 HSP 2 Score: 26.9498 bits (58), Expect = 8.842e-40 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 627 QIWWFEVDG 653 QIWWFEVDG Sbjct: 153 QIWWFEVDG 161
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.402e-38 Identity = 78/163 (47.85%), Postives = 110/163 (67.48%), Query Frame = 1 Query: 151 MGANVSGIIADSNGDELSSLRPRLSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYL--SKKHLYARLCNPSPFDGGNK-MWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYLHK 630 MGA S I+ + + L D+PE+C+ + M+++PPEIC LAR+N++F AS +D +WE KLPSNY+F+V ++L + + D L KK +YARLC P+ FD G K WLDK +G + ++IS KA+ ITGIDDRRYW HIS++ESRF S+ YL + Sbjct: 1 MGAASSSIV---RSEPFAGKLCGLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRRYWEHISSDESRFGSITYLRQ 160
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.967e-17 Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 220 LSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCNPSPF--DGGNKMWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYL 624 L D+PE CV++++ P + C LA +++ F A +D +WE +P Y+ ++ S++ +LSKK LY LC+ S DG +W++K C+ IS+ LAI + + W I ++RF++VA L Sbjct: 36 LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLI-------SQSRAFKFLSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAEL 165
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 56/163 (34.36%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 142 RALMGANVSGIIADSNGDELSSLRPRLSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLC-NPSPFDGGNK-MWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYL 624 R++MG SG G+ +S +PE C++ ++ P + C A +++ F A S+D +W+ LP Y+ +V S S+ + SKK LY LC NP + G K WL+K +G C+ +SSK L IT YW IS ESRF +A L Sbjct: 41 RSMMGQYHSG------GEIVSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLV-----SRSRV----FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAEL 188
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.450e-16 Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 184 SNGDELSSLRP-RLSDMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCNPSPF--DGGNKMWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYL 624 S DE+S R R +PE C++ V+ H P + C +A ++++ + A+ +D +WE LPS Y SS ++LSKK ++ L + S +G W++K +G C +S+ L I D YW I+ ES+F+ VA L Sbjct: 19 SRNDEISVTRASRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEY---------SSLVLQSANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAEL 159
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16 Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 226 DMPESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCNPSPF---DGGNKMWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYL 624 D+PE C+A ++ P + C+++ +++ R A+ ++ WE LPS+Y+ +D N + S K L+ R C SP DG W++K +G C +S++ L I +D +W +S +SRF+ VA L Sbjct: 5 DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYID---------NSLSRFSNKQLFLRFCE-SPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGL 130
BLAST of FC932552 vs. ExPASy Swiss-Prot
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 232 PESCVALVLMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGSSSKTNMVDYLSKKHLYARLCN-PSPFDGGNK-MWLDKNTGGLCVSISSKALAITGIDDRRYWTHISTEESRFQSVAYL 624 PE C++ ++ +P + C A +++ F +D IWE LP++Y+ ++ S+ + SKK LY LCN P FD K +WL+K +G C+ +S+ L+I D+ +YW I ESRF+ VA L Sbjct: 18 PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLI-----PPSRV----FSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKL 141 The following BLAST results are available for this feature:
BLAST of FC932552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932552 ID=FC932552; Name=FC932552; organism=Citrus clementina; type=EST; length=754bpback to top |