FC932591

Overview
NameFC932591
Unique NameFC932591
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11525 contig Ccv1_Contig11525:201..928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.854e-19
Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 2
Query:  146 ESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            E  +P +  LK   + V+A+++     +  E     P +R+V   + G +++DI E  +RGI V N  +V ++  ADLA  LL+   R++   DRFV+  +W +   A     +   +G  + GK +GI+GLG IG  +AKR   F   I Y SRT+K  V       +  + +L    D +++   LT E  H+IN++
Sbjct:   31 EKEIPREILLKK-VKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWF---LGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEE 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18
Identity = 67/208 (32.21%), Postives = 104/208 (50.00%), Query Frame = 2
Query:  122 KFKFLKAWESP-LPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            KF  ++ W+ P  P    L    + V+A+++     V  E L   P ++++   + G +++DI E  +RGI V N   V ++  ADLA  LL+ + R I  +D FV+  +W   +++  G    + +G  L GK +GIVG G IG  +AKR   FG  I Y SRT+KP         Y +   L    D + +   LT E  HMI ++
Sbjct:   21 KFYEIELWKDPKAPPRGVLLEKVREVDALVTLVTDKVDKELLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEW---KKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEK 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.604e-18
Identity = 59/204 (28.92%), Postives = 104/204 (50.98%), Query Frame = 2
Query:  134 LKAWESPLPLD-QFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            ++ WE    +  + L    + V+A+++     + AE     P +++V   + G +++DI E  + G+ + N  +V +   AD+A  LL+   R +  +D+FV+  +W +   A     +   +G  + G+ +GIVG G IG  +A+R   FG  I YNSRT+KP V       +  + EL    D +++   LT E  HMIN++
Sbjct:   25 VEVWEDEHEISREVLLEKVRDVDALVTMLSERIDAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMF---LGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEE 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.401e-18
Identity = 59/204 (28.92%), Postives = 100/204 (49.02%), Query Frame = 2
Query:  134 LKAWESPLPLD-QFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            ++ WE    +  + L    + V+A+++     +  E     P +R+V   + G +++D+ E  +RGI V N   V ++  ADLA  LL+   R++   D+F +  +W +   A     +   +G  + GK +GI+G G IG  +AKR   F   I Y SRT+KP V       +  + EL    D +++   L  E  HMIN++
Sbjct:   26 VEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWF---LGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEE 226          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17
Identity = 62/205 (30.24%), Postives = 103/205 (50.24%), Query Frame = 2
Query:  134 LKAWESP--LPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            ++ WE    +P ++ L+   + V+A+++     +  E     P +R+V   + G +++D+ E  RRGI V N  +V +   AD A  LL+   R++   D+FV+  +W R   A     +   +G +L GK +GIVG G IG  +A+R   F   I Y SRT+K          Y  + E+    D +I+   LT E  +MIN++
Sbjct:   25 VEVWEEEREIPREKLLEK-VKDVDALVTMLSERIDQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWF---LGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEE 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17
Identity = 60/199 (30.15%), Postives = 101/199 (50.75%), Query Frame = 2
Query:  146 ESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAE-PHMINKQ 724
            E  +P +  LK   + V+A+++     + +E     P +R+V   + G +++D+ E  RRGI V N  +V ++  AD A  LL+   R +  +D F +  +W R   A     +   +G  + GK +GIVG G IG  VA+R   FG  I Y SR++KP         + ++ +L    D +++   LT E  +MIN++
Sbjct:   31 EREIPREVLLKK-VRDVDALVTMLSERIDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWF---LGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEE 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 61/199 (30.65%), Postives = 97/199 (48.74%), Query Frame = 2
Query:  146 ESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            E  +P +  L+   + V+A+++     +  E     P +R+V   + G ++VD+ E  RRGI V N  +V +   AD A  LL+   R +  +D F +  +W R   A     +   +G  + GK +GI+G G IG  VA+R   FG  I Y SRT+KP         +  + EL    D +++   LT E  HMI ++
Sbjct:   31 EREIPREVLLEK-VRDVDALVTMLSERIDGEVFDNAPRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMF---LGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKPLEELLKESDFVVLAVPLTKETYHMIGER 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  158 PLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF----YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            P  + L  + +  +A+L      + AE +   P ++++ T S G +H+DI E  +RGI V +   V ++ VA+  VGL++ + R I  +D+ ++  QW +P      + Y L  G +L GK +G+VGLG IG   AKRL +F   I Y    ++  V        ++++  L    DI+ I   LT E  H+IN++
Sbjct:   36 PSREELLRNIRDKDALLCLLTDKIDAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKP-----WNPYFL-TGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYDIERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPLTKETYHLINEE 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 62/209 (29.67%), Postives = 106/209 (50.72%), Query Frame = 2
Query:  119 NKFKFLKAWES--PLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINK 721
            +K+  ++ W+   P P +  L + A+  +A+ +     +  + L   P +R+V   + G +++D+    R GI V N   V +E  A+    L++   R +  +D FV+  +W R R    G    + +G +L GK +GI+G+G IGS VA+   AFG  I Y+SR++K  +       Y ++ +L    DIL I   LT E  H+I +
Sbjct:   21 SKYYDVEVWDKYQPPPYETLL-SKAREADALYTLLTDRIDCDLLSQAPRLRIVAQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRT---GWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYHSRSRKREIEKELGAEYRSLEDLLRESDILSIHLPLTDETRHLIGE 225          
BLAST of FC932591 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 58/202 (28.71%), Postives = 94/202 (46.53%), Query Frame = 2
Query:  146 ESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQ--W---LRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAEP-HMINKQ 724
            E+P P  + +    +  +A++S    P+ AE     P +R+V   + G +++D+ E  +RGI V N   V +E  AD A  LL+   R +  +DR+V++  W     P      D Y         G+ +GIVG+G IG+ VA+R   FG  I Y    ++          Y  + +L    D + +   LT E  HMI ++
Sbjct:   31 EAP-PSKKVIIERVKDCDALVSLLTDPIDAEVFEAAPKLRIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVY---------GRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRREDFEKELGVEYVPLEKLLEESDFVSLHVPLTEETYHMIGEE 222          
The following BLAST results are available for this feature:
BLAST of FC932591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
GYAR_PYRHO6.854e-1931.16Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_THELI1.527e-1832.21Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_THEON2.604e-1828.92Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRAB3.401e-1828.92Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_PYRFU1.293e-1730.24Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_PYRKO2.879e-1730.15Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEGJ8.378e-1730.65Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_THEPD1.866e-1631.12Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_AERPE7.841e-1529.67Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]
GYAR_KORCO5.083e-1428.71Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]

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Properties
Property NameValue
Genbank descriptionC34210C07EF PostHarveN Citrus clementina cDNA clone C34210C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932591 ID=FC932591; Name=FC932591; organism=Citrus clementina; type=EST; length=728bp
GACGATGGAAGCATATCATGGGCATGGCAAAGAAAAAGAATCCCAAGACC
TCCCGAGAGTACTCCTGTTTAAGCCGCCACCGGACTTTCACCTCTTCGGA
GACGAATGCTTTTCCTCAAACAAGTTCAAGTTCTTGAAGGCGTGGGAATC
TCCTCTCCCACTTGACCAATTCTTGAAAACACATGCACAGTCAGTCGAAG
CCATTCTCTCATCGGGTGGCGCCCCGGTGACAGCCGAGACCTTGCGGCTG
ATGCCGGCCGTTCGATTGGTGATGACCACGAGCGCCGGACTCAACCACGT
CGACATCGCCGAGTGCCGACGCCGCGGCATCACTGTAGCTAATGCTGGAA
ACGTTTTCTCCGAAGATGTTGCTGATTTGGCCGTGGGGTTGCTTATTGAT
TTGTTAAGGAACATTTCTGCTTCTGATCGGTTTGTTAAACAATGGCTTCG
GCCTCGTCAAGCTGCTGAAGGGGACTGCTATTCTCTCGGCATCGGCAGTA
AGCTGGGAGGTAAGCGAGTTGGGATTGTTGGATTGGGAAGCATTGGCTCA
TTAGTTGCTAAAAGACTAGATGCCTTTGGATGCTCCATATCATACAACTC
AAGGACGAAGAAACCATCTGTCTCATACCCTTTCTATTCAAATGTCTGTG
AACTTGCAGCTAACTGCGATATCCTCATTATTTGCTGTGGATTAACTGCT
GAACCACACATGATCAATAAGCAGTCTT
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