FC932614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 8.253e-60 Identity = 125/204 (61.27%), Postives = 136/204 (66.67%), Query Frame = 3 Query: 81 MSLTIPTNLSKPLLKPRSNSQLSHA-KLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLAS 689 MSLTIP NL +L PRSN L+ + S C ++AF P PAVADISGLTPCK+SKQFAKR Y P+ APALA+ A +EKTKRRFDNYGKYGLLCGSDGLPHLIV+GDQRHWGEFITPG+LFLYIAG IGWVGRSYLIAISGEKKPAMKEIIIDVPLAS Sbjct: 1 MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSSSTPQS-------MKAFSAAVALSSILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLAS 194
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 9.783e-59 Identity = 123/204 (60.29%), Postives = 130/204 (63.73%), Query Frame = 3 Query: 81 MSLTIPTNLSKPLL-KPRSNSQLSHAKLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLAS 689 MS TIPTNL KPL KP+ S S A SK + A P A+ADI+GLTPCKESKQFAKR Y D APALA+KATMEKTK+RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAG IGWVGRSYLIAI EKKP KEIIIDVPLAS Sbjct: 1 MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 204 HSP 2 Score: 23.483 bits (49), Expect = 9.783e-59 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 707 FSWPVAAYK 733 FSWPVAAY+ Sbjct: 211 FSWPVAAYR 219
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 1.159e-56 Identity = 119/205 (58.05%), Postives = 129/205 (62.93%), Query Frame = 3 Query: 81 MSLTIPTNLSKPL--LKPRSNSQLSHAKLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLAS 689 MS TI T+ +PL +S+ S +K++ I C L A PA ADISGLTPCKESKQFAKR Y PD APALA+KATMEKTKRRFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAG IGWVGRSYLIAI EKKP KEIIIDVPLA+ Sbjct: 1 MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAALALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAT 205 HSP 2 Score: 23.483 bits (49), Expect = 1.159e-56 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 707 FSWPVAAYK 733 FSWPVAAY+ Sbjct: 212 FSWPVAAYR 220
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.781e-54 Identity = 101/133 (75.94%), Postives = 112/133 (84.21%), Query Frame = 3 Query: 291 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLAS 689 P PA ADI+GLTPCKESK FAKR Y PD APALA++AT++KTKRRF+NYGK+GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAG IGWVGRSYLIA+SGEKKPAM+EIIIDV LA+ Sbjct: 72 PPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA 204
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_CHLRE (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAF PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34 Identity = 77/137 (56.20%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 291 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLI----VSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLAS 689 P A+ADI+GLTPC ESK +AK Y D APA+A+KATME+TK RF NY K GLLCG+DGLPHLI ++ H GE P FLY+AG IG+VGR YLIA+ GE KP KEIIIDVPLA+ Sbjct: 57 PSAAMADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIIDVPLAT 193
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_GUITH (Photosystem I reaction center subunit III OS=Guillardia theta GN=psaF PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.916e-32 Identity = 69/132 (52.27%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 291 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLA 686 P + AD++GL PCK SK+F +R Y P+ P LA++ + KTK RF YG GLLCG+DGLPHLI G H GEF+ PGL FLYIAG IGWVGR+Y+ S KP KEIIIDVP+A Sbjct: 17 PVASHADVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKTKNRFTQYGNAGLLCGTDGLPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKPTEKEIIIDVPVA 148
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_PORYE (Photosystem I reaction center subunit III OS=Porphyra yezoensis GN=psaF PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.268e-32 Identity = 69/132 (52.27%), Postives = 84/132 (63.64%), Query Frame = 3 Query: 291 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLA 686 P A A+++GL PCK+S F KR Y D PALA+ +EKTK RF YG+ GLLCG+DGLPHLI G G+F+ PGLLFLYI G IGWVGR YL++++ KP KEII+DVPLA Sbjct: 15 PIIANAEVAGLVPCKDSAAFNKRMVNSVKKLQARLAKYDADTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLA 146
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_CYAPA (Photosystem I reaction center subunit III OS=Cyanophora paradoxa GN=psaF PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.766e-31 Identity = 66/131 (50.38%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 294 QPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLA 686 +P AD++GL PC +S F +R Y P APA A++ ++KT++RFD Y GLLCG+DGLPHLI G H GEF PGLLFLYIAG IGW GRSYL A++ KEIIID+P+A Sbjct: 21 RPVRADVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNSGLLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTEKEIIIDIPVA 151
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_PORPU (Photosystem I reaction center subunit III OS=Porphyra purpurea GN=psaF PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.613e-31 Identity = 66/127 (51.97%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 306 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLA 686 A+++GL PCK+S F KR Y + PALA+ +EKTK RF YG+ GLLCG+DGLPHLI G G+F+ PGLLFLYI G IGWVGR YL++++ KP KEII+DVPLA Sbjct: 24 AEVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLA 150
BLAST of FC932614 vs. ExPASy Swiss-Prot
Match: PSAF_ODOSI (Photosystem I reaction center subunit III OS=Odontella sinensis GN=psaF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.899e-30 Identity = 67/132 (50.76%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 291 PQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYTPDGAPALAVKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGLIGWVGRSYLIAISGEKKPAMKEIIIDVPLA 686 P A+ADI GLT C ES F KR Y PALA++ +E+T+ RFD Y + LLCG+DGLPHLI G H EFI PG F+YI+G IGWVGR YL A+S K P EIII+VPLA Sbjct: 19 PNRALADIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERTQARFDKYSRSELLCGTDGLPHLIADGRWSHAAEFILPGFGFIYISGWIGWVGRKYLRAVSTTKNPTESEIIINVPLA 150 The following BLAST results are available for this feature:
BLAST of FC932614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932614 ID=FC932614; Name=FC932614; organism=Citrus clementina; type=EST; length=740bpback to top |