FC932626

Overview
NameFC932626
Unique NameFC932626
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length475
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6238 contig Ccv1_Contig6238:230..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BD31B_ORYSJ (Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica GN=Os05g0446300 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.236e-28
Identity = 53/62 (85.48%), Postives = 60/62 (96.77%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPK+KT+RVK PEGWELIEPTLR+L+AKMREAENDPHDGKRKCE LWPIF+I+HQKSRYI+D
Sbjct:    1 MPKIKTSRVKYPEGWELIEPTLRDLEAKMREAENDPHDGKRKCEALWPIFRISHQKSRYIYD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BD31A_ORYSJ (Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica GN=Os01g0857700 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.155e-25
Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPK+KT+RVK P GWELIEPT+REL AKMREAEND HDGKRKCE LWPIF+I+HQ+SRYI+D
Sbjct:    1 MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYIYD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BD31C_ORYSJ (Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica GN=Os12g0149800 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 7.488e-25
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPK+KT+ VK P+GWELIEPTL EL +KMREAENDPHDG+RKCE LWPIFKI HQ+SRY++D
Sbjct:    1 MPKIKTSGVKYPDGWELIEPTLSELHSKMREAENDPHDGRRKCEALWPIFKINHQRSRYLYD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BUD31_BRABE (Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.322e-21
Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPKV+ +R   PEGWELIEPTL EL  KMREAE +PH+GKRK E LWPIFKI HQKSRYIFD
Sbjct:    1 MPKVRRSRKPPPEGWELIEPTLDELDQKMREAETEPHEGKRKVEALWPIFKIHHQKSRYIFD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BUD31_XENLA (Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.726e-21
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPKVK +R   P+GWELIEPTL EL  KMREAE DPH+GKRK E+LWPIF+I HQK+RYIFD
Sbjct:    1 MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETDPHEGKRKVESLWPIFRIHHQKTRYIFD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BUD31_RAT (Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPKVK +R   P+GWELIEPTL EL  KMREAE +PH+GKRK E+LWPIF+I HQK+RYIFD
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BUD31_HUMAN (Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPKVK +R   P+GWELIEPTL EL  KMREAE +PH+GKRK E+LWPIF+I HQK+RYIFD
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BUD31_GECJA (Protein BUD31 homolog OS=Gecko japonicus GN=BUD31 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPKVK +R   P+GWELIEPTL EL  KMREAE +PH+GKRK E+LWPIF+I HQK+RYIFD
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BUD31_BOVIN (Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPKVK +R   P+GWELIEPTL EL  KMREAE +PH+GKRK E+LWPIF+I HQK+RYIFD
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFD 62
[Close]
BLAST of FC932626 vs. ExPASy Swiss-Prot
Match: BUD31_DANRE (Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.119e-20
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 3 
Query:  288 MPKVKTNRVKIPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFD 473
            MPKVK +R   P+GWEL+EPTL EL  KMREAE +PH+GKRK E+LWPIF++ HQ+SRYIFD
Sbjct:    1 MPKVKRSRKPPPDGWELVEPTLDELDQKMREAETEPHEGKRKVESLWPIFRLHHQRSRYIFD 62
The following BLAST results are available for this feature:
BLAST of FC932626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BD31B_ORYSJ7.236e-2885.48Protein BUD31 homolog 2 OS=Oryza sativa subsp. jap... [more]
BD31A_ORYSJ1.155e-2580.65Protein BUD31 homolog 1 OS=Oryza sativa subsp. jap... [more]
BD31C_ORYSJ7.488e-2577.42Protein BUD31 homolog 3 OS=Oryza sativa subsp. jap... [more]
BUD31_BRABE1.322e-2175.81Protein BUD31 homolog OS=Branchiostoma belcheri PE... [more]
BUD31_XENLA1.726e-2174.19Protein BUD31 homolog OS=Xenopus laevis GN=bud31 P... [more]
BUD31_RAT5.022e-2172.58Protein BUD31 homolog OS=Rattus norvegicus GN=Bud3... [more]
BUD31_HUMAN5.022e-2172.58Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=... [more]
BUD31_GECJA5.022e-2172.58Protein BUD31 homolog OS=Gecko japonicus GN=BUD31 ... [more]
BUD31_BOVIN5.022e-2172.58Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 ... [more]
BUD31_DANRE1.119e-2069.35Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC34210F06EF PostHarveN Citrus clementina cDNA clone C34210F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932626 ID=FC932626; Name=FC932626; organism=Citrus clementina; type=EST; length=475bp
GGTACGGTTNCGGTTTAACGCTAAACCCGGTCGGTTCAAACCAACCGACT
TGAAACTATATACGCATCCGTATAAGGCAAAAAACCGGAACGCAGTCCCT
AGTCCCCCTTCTCTTTCTTCTTCTTTATCGTGAAAGAGAGAGAATACCTG
CGCCCACGCTGCAGCCGCTGCCGCCGCTGCTGACAAACGCCGACGCCGAC
GCCAACTCCCGCGCCCACGGTCTAGTTTCTCTAACCCTAAGCTAACAAAA
CAATCCGAGGATAATACGTAGCTGAACAGGTAGAAAAATGCCAAAGGTAA
AGACAAACCGTGTCAAGATTCCGGAGGGATGGGAATTGATTGAGCCTACA
CTTCGTGAATTACAGGCAAAGATGAGAGAAGCCGAGAATGATCCCCATGA
TGGCAAGAGGAAATGTGAGACATTGTGGCCTATTTTTAAAATAGCACATC
AGAAGAGCCGCTATATTTTTGACCT
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