BG733602

Overview
NameBG733602
Unique NameBG733602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length194
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
[Close]
BLAST of BG733602 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.215e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 2 
Query:    2 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 157
            DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE
Sbjct:   17 DSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68

HSP 2 Score: 25.0238 bits (53), Expect = 1.215e-24
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  165 ITIDIALWKF 194
            ITIDIALWKF
Sbjct:   71 ITIDIALWKF 80
The following BLAST results are available for this feature:
BLAST of BG733602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
EF1A_WHEAT1.215e-24100.00Elongation factor 1-alpha OS=Triticum aestivum GN=... [more]
EF1A_VICFA1.215e-24100.00Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]
EF1A_TOBAC1.215e-24100.00Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_SOYBN1.215e-24100.00Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_SOLLC1.215e-24100.00Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A_ORYSJ1.215e-24100.00Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A_MANES1.215e-24100.00Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A_MAIZE1.215e-24100.00Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3... [more]
EF1A_ARATH1.215e-24100.00Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A2_DAUCA1.215e-24100.00Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCs-20d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-20d, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733602 ID=BG733602; Name=BG733602; organism=Citrus sinensis; type=EST; length=194bp
CGACTCTGGGAAGTCAACCACCACCGGTCACTTGATCTACAAGCTTGGAG
GTATTGACAAGCGTGTGATTGAGCGGTTTGAGAAGGAAGCTGCTGAGATG
AACAAGAGATCATTCAAGTACGCATGGGTGCTTGACAAGCTCAAGGCTGA
GCGTGAGCTCGCGTATCACCATTGATATTGCTTTGTGGAAGTTC
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