BQ623286
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 424.476 bits (1090), Expect = 2.609e-118 Identity = 195/227 (85.90%), Postives = 208/227 (91.63%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREQR 682 YFSWKYSHRRHHSNTGSL+RDEVFVPKQK+ I WY+KYLNNP GRV+TL VTLTLGWPLYLA NVSGRPYDRFACH+DPYGPIYSDRERLQI ISDAG+LA++Y L+ L AKGL +V C+YG PLLVVNGFLVLIT LQHTHP+LPHY SSEWDW RGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYY+FD TPF KAMWRE R Sbjct: 134 YFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREAR 360
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 2.615e-110 Identity = 183/227 (80.62%), Postives = 201/227 (88.55%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREQR 682 YFSWKYSHRRHHSNTGSL+RDEVFVPKQK+AI WY KYLNNPLGR++ LTV LGWPLYLAFNVSGRPYD FACHF P PIY+DRERLQI +SDAGILA+ + LY AA+G+ + C+YG PLL+VN FLVLIT LQHTHPSLPHY SSEWDW RGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILG+YYQFDGTP+Y AM+RE + Sbjct: 134 YFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAK 360
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 393.275 bits (1009), Expect = 6.440e-109 Identity = 182/228 (79.82%), Postives = 198/228 (86.84%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPY-DRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREQR 682 YFSWKYSHRRHHSNTGSL+RDEVFVPK+K+ I WY KYLNNPLGR + LTV TLGWPLY AFNVSGRPY + FACHF P PIY+DRERLQI +SDAGILA+ Y LY AA+G+ + C+YG PLL+VN FLVLIT LQHTHPSLPHY SSEWDW RGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAME TKAIKPILG+YYQFDGTP+ KAMWRE + Sbjct: 134 YFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYWAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEVTKAIKPILGDYYQFDGTPWVKAMWREAK 361
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 4.615e-107 Identity = 173/227 (76.21%), Postives = 197/227 (86.78%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREQR 682 YFSWK SHRRHHSNTGSLDRDEVFVPK K+ + W++KYLNNPLGR ++L VTLT+GWP+YLAFNVSGRPYD FA H+ PY PIYS+RERL I +SD + ++ YSLY + KGLV++ C+YG PLL+VNGFLV IT LQHTH +LPHY SSEWDW +GALAT+DRDYGILNKVFH+ITDTHVAHHLFSTMPHYHAMEAT AIKPILGEYYQFD TPFYKA+WRE R Sbjct: 138 YFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMYLAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVALFSVTYSLYRVATLKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHFALPHYDSSEWDWLKGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYQFDDTPFYKALWREAR 364
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 1.266e-80 Identity = 133/227 (58.59%), Postives = 170/227 (74.89%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREQR 682 YFSWKYSHR HH+NT SLD DEV++PK K + Y K LN+P GR++ + +T TLG+PLYL N+SG+ Y+RFA HFDP PI+ +RER Q+++SD G+LA++Y + VAAKG +V CIYG P+L V F +IT L HTH SLPHY SSEW+W RGAL+T+DRD+G LN V H++T THV HHLFS +PHYHA EA AI +LG++Y+ D TP KAMWRE + Sbjct: 127 YFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITFTLGFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDLGLLAVLYGVKLAVAAKGAAWVTCIYGIPVLGVFIFFDIITYLHHTHLSLPHYDSSEWNWLRGALSTIDRDFGFLNSVLHDVTHTHVMHHLFSYIPHYHAKEARDAINTVLGDFYKIDRTPILKAMWREAK 353
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 1.116e-52 Identity = 108/244 (44.26%), Postives = 140/244 (57.38%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYG-ILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREQR 682 Y SW+ SH +HH TG + +D+VFVPK ++ +G K +L+ P+ + + + GWP YL N SG+ Y R+ HF Y PI+ R IIISD G+LA + +L L+ V Y P L VN +LVLIT LQHT P LPHY W++ RGAL TVDR +G L+ +FH I THVAHHLFS MP YHA EAT +K +LGEYY +D +P A+WR R Sbjct: 141 YHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKENAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIVPYLFVNFWLVLITFLQHTDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVVAVWRSFR 384
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 108/244 (44.26%), Postives = 140/244 (57.38%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYG-ILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREQR 682 Y SW+ SH +HH TG + +D+VFVPK ++ +G K +L+ P+ + + + GWP YL N SG+ Y R+ HF Y PI+ R IIISD G+LA + +L L+ V Y P L VN +LVLIT LQHT P LPHY W++ RGAL TVDR +G L+ +FH I THVAHHLFS MP YHA EAT +K +LGEYY +D +P A+WR R Sbjct: 141 YHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKESAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIIPYLFVNFWLVLITFLQHTDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVVAVWRSFR 384
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.913e-36 Identity = 83/217 (38.25%), Postives = 115/217 (53.00%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVP---KQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SH+ HH N G+++ DE +VP K +G+ K+L + + L +P+YL G+ HF+PY ++ ER ++ S M L L A G + +F IYG P L+ +L +T L H LP Y EW + RG L TVDRDYG+ N + H+I THV HHLF +PHYH EATKA KP+LG+YY+ Sbjct: 126 YHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPL-------LAYPMYLMKRSPGKS----GSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDI-GTHVIHHLFPQIPHYHLREATKAAKPVLGKYYR 330
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.038e-35 Identity = 84/215 (39.07%), Postives = 115/215 (53.49%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLT-LGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G ++ DE +VP + Y K ++ R++ TV L L +PLYL + G+ HF+PY +++ ER I S M SL L G + V +YG P ++ +L +T L H LP Y EW + RG L T+DRDYGI N + H+I THV HHLF +PHYH ++ATKA K +LG YY+ Sbjct: 130 YHGWRISHRTHHQNHGHVENDESWVPLPERV---YKKLPHST--RMLRYTVPLPMLAYPLYLCYRSPGKE----GSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYR 334
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.411e-33 Identity = 82/216 (37.96%), Postives = 114/216 (52.78%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLG-RVITLTVTLT-LGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G ++ DE +VP + Y N P R++ TV L L +P+YL + G+ HF+PY +++ ER I S M+ +L L V V +YG P ++ +L +T L H LP Y EW + RG L T+DRDYGI N + H+I THV HHLF +PHYH ++AT+A K +LG YY+ Sbjct: 127 YHGWRISHRTHHQNHGHVENDESWVPLPEKL------YKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKE----GSHFNPYSSLFAPSERKLIATSTTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYR 331 The following BLAST results are available for this feature:
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623286 ID=BQ623286; Name=BQ623286; organism=Citrus sinensis; type=EST; length=686bpback to top |