BQ623520

Overview
NameBQ623520
Unique NameBQ623520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13682 contig Csv1_Contig13682:68..749. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_PYRHO (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Pyrococcus horikoshii GN=purE PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.989e-18
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  293 TDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            ++ P+VGIIM SD DLPVM +AAR L +FGVPYEI I+  H+  + A  YA  A+ERGI++II G    AHL G+ A+ + + VI
Sbjct:    7 SEKPLVGIIMGSDSDLPVMKEAARILEEFGVPYEITIISAHRTPERAYEYAKKAEERGIEVIIAGAGGAAHLPGIIASLTVLPVI 91          

HSP 2 Score: 23.483 bits (49), Expect = 8.989e-18
Identity = 15/35 (42.86%), Postives = 23/35 (65.71%), Query Frame = 3
Query:  552 VPLLSEDWSENDVINSI-RMPSHVQVASVPRNNAK 653
            VP+ S+  +  D + SI +MPS + VA+V  +NAK
Sbjct:   93 VPIKSKALNGLDSLLSIVQMPSGIPVATVAIDNAK 127          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_YEAST (Phosphoribosylaminoimidazole carboxylase OS=Saccharomyces cerevisiae GN=ADE2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.413e-15
Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 2
Query:  122 VRMFNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVRE-PSTVFEEENPNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            V ++    RPN  R V  G I ++ASS      R    +   + P  +   +  + ++   P+VGIIM SD DLPVM+ A   L DFGVP+E+ I+  H+      +YA+SA +RGIK II G    AHL G+ AA + + VI
Sbjct:  346 VYLYGKESRPN--RKV--GHINIIASSMAECEQRLNYITGRTDIPIKISVAQKLDLEAMVKPLVGIIMGSDSDLPVMSAACAVLKDFGVPFEVTIVSAHRTPHRMSAYAISASKRGIKTIIAGAGGAAHLPGMVAAMTPLPVI 484          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_PYRAB (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Pyrococcus abyssi GN=purE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14
Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 2
Query:  302 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            P VGIIM SD DLPVM +AA+ L DF V YE+K++  H+  +    YA +A+ERGI++II G    AHL GV AA + I VI
Sbjct:    7 PKVGIIMGSDSDLPVMKEAAKVLEDFEVDYEMKVISAHRTPERLHEYARTAEERGIEVIIAGAGGAAHLPGVLAALTMIPVI 88          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_THEMA (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Thermotoga maritima GN=purE PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.811e-14
Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 2
Query:  302 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            P VGIIM SD DLPVM  AA  L +FG+ YEI I+  H+       YA +A+ERGI++II G    AHL G+ A+ + + VI
Sbjct:    2 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHLPVI 83          

HSP 2 Score: 23.0978 bits (48), Expect = 1.811e-14
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  582 NDVINSIRMPSHVQVASVPRNNAK 653
            + + + ++MP  V VA+V  NNAK
Sbjct:   96 DSLFSIVQMPGGVPVATVAINNAK 119          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_DEBOC (Phosphoribosylaminoimidazole carboxylase OS=Debaryomyces occidentalis GN=ADE2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  122 VRMFNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            V ++  S RPN       G I +++SS     SR   D  + + S + E   P     + P+V IIM SD DLPVM+  A  L  FGVP+E+ I+  H+       YA+ A +RG+K+II G    AHL G+ AA + + VI
Sbjct:  343 VYLYGKSTRPNR----KMGHINIVSSSMEDCESRL--DYIIGKSSKIPENLIPK----EKPLVSIIMGSDSDLPVMSVGANILKRFGVPFELTIVSAHRTPHRMTQYAIEAPKRGLKVIIAGAGGAAHLPGMVAAMTPLPVI 474          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_CANAL (Phosphoribosylaminoimidazole carboxylase OS=Candida albicans GN=ADE2 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 2
Query:  122 VRMFNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTD--APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            V ++  + RP        G I V+ SS   A SR    S +   +T    E P   +TD  +P+VGIIM SD DLPVM   AR L  FGVP+E+ I+  H+       YA+ A +RG+K II G    AHL G+ AA + + VI
Sbjct:  346 VYLYGKATRPER----KMGHINVVTSSMQDAESRL---SYILGDTT----EIPKSLATDKESPLVGIIMGSDSDLPVMAVGARILKQFGVPFELTIVSAHRTPHRMSEYAIEAPKRGLKCIIAGAGGAAHLPGMVAAMTPLPVI 478          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_CRYNE (Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans GN=ADE2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 2
Query:  302 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            P+VGIIM SD DLPVM+ A + L  FGVPYE+ I   H+  +  + YA +A +RG++ II G    AHL G+ A+ + + VI
Sbjct:  412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAADRGLRAIIAGAGGAAHLPGMVASETSLPVI 493          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_SCHPO (Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces pombe GN=ade6 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 2
Query:  287 DSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            D  ++P+VGIIM SD DL  M DAA  L +F VPYE+ I+  H+     ++YA +A  RG+++II G    AHL G+ AA + + VI
Sbjct:  381 DPVESPVVGIIMGSDSDLSKMKDAAVILDEFKVPYELTIVSAHRTPDRMVTYARTAASRGLRVIIAGAGGAAHLPGMVAAMTPLPVI 467          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_CRYNV (Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans var. grubii GN=ADE2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 2
Query:  302 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            P+VGIIM SD DLPVM+ A + L  FGVPYE+ I   H+  +  + YA +A  RG++ II G    AHL G+ A+ + + VI
Sbjct:  412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAAGRGLRAIIAGAGGAAHLPGMVASETSLPVI 493          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_CANGA (Phosphoribosylaminoimidazole carboxylase OS=Candida glabrata GN=ADE2 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13
Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = 2
Query:  122 VRMFNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVR-EPSTVFEEENPNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            V ++    +PN  R V  G I ++ SS      R +    ++ +P      E  N +    P+VG+IM SD DLPVM+ A + L  F VP+E+ I+  H+       YA  A  RGIK+II G    AHL G+ AA + + VI
Sbjct:  345 VYLYGKESKPN--RKV--GHINIVCSSMKECDKRLQFIMGLKTDPIKHSVMEILNAEEVRKPLVGVIMGSDSDLPVMSAACKMLEQFEVPFEVTIVSAHRTPYRMNKYASEAVSRGIKVIIAGAGGAAHLPGMVAAMTPVPVI 483          
The following BLAST results are available for this feature:
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PUR6_PYRHO8.989e-1851.76Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_YEAST1.413e-1538.46Phosphoribosylaminoimidazole carboxylase OS=Saccha... [more]
PUR6_PYRAB1.196e-1452.44Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_THEMA1.811e-1448.78Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_DEBOC2.041e-1437.32Phosphoribosylaminoimidazole carboxylase OS=Debary... [more]
PUR6_CANAL3.481e-1439.58Phosphoribosylaminoimidazole carboxylase OS=Candid... [more]
PUR6_CRYNE1.727e-1346.34Phosphoribosylaminoimidazole carboxylase OS=Crypto... [more]
PUR6_SCHPO2.947e-1344.83Phosphoribosylaminoimidazole carboxylase OS=Schizo... [more]
PUR6_CRYNV5.026e-1346.34Phosphoribosylaminoimidazole carboxylase OS=Crypto... [more]
PUR6_CANGA6.564e-1335.66Phosphoribosylaminoimidazole carboxylase OS=Candid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00611 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00611 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623520 ID=BQ623520; Name=BQ623520; organism=Citrus sinensis; type=EST; length=683bp
GGCGGTGCTCACAATGAAGACCATTACCATTGATCTGCGAGTGCTATTTT
GTGTACTCAACAAGGTCATCGTTACTTCTTGCTTAATAGAACCGCGGCAA
AAAAAATTTGTTGAAGGAAAAGTTCGGATGTTCAATAACAGCAAGCGTCC
CAATTCGGTTCGTACTGTAAGCCGGGGCACAATTCCTGTTTTAGCCTCGT
CGAACGGCTCTGCTACTTCCAGAAGGAAGGATGATTCATCTGTCCGTGAA
CCATCAACTGTCTTCGAGGAAGAAAACCCTAATGGTGACTCTACAGATGC
CCCAATTGTTGGGATAATCATGGAATCGGATTTGGATCTTCCTGTTATGA
ATGATGCTGCGAGGACCTTGAGTGACTTCGGCGTACCTTATGAGATTAAA
ATATTACCACCTCATCAAAATTGCAAGGAGGCATTGTCTTATGCATTGTC
GGCTAAGGAGCGAGGCATTAAGATCATTATTGTTGGTGACCGTGTTGAAG
CCCATTTATCAGGTGTAGCTGCTGCAAATTCTCAAATACTTGTTATTTCG
TGTTCCTTTATTAAGTGAAGACTGGAGTGAAAATGATGTAATCAACTCAA
TTCGGATGCCAAGTCATGTCCAAGTTGCATCTGTTCCAAGAAATAATGCG
AAAATGCTGCTCTATATGCAGTAAAGGGACTTG
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