BQ623723
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.589e-30 Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 2 Query: 2 DFLRLINEPVQGGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 238 DFLRLINEPV+G E N+ +QL MPQ++ VTPEEREAIERLE MGFDRA+VLEVFFACNKNEELAANYLLDHMHEFED Sbjct: 300 DFLRLINEPVEGEE-NVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 2.996e-29 Identity = 67/83 (80.72%), Postives = 73/83 (87.95%), Query Frame = 2 Query: 2 DFLRLINEPVQGG--EGNLGDQLAGLMPQ--SIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 238 DFLRLINEPV+GG GNL Q+A MPQ +IQVT EEREAIERLEAMGF+RA+VLEVFFACNKNEELAANYLLDHMHEFE+ Sbjct: 337 DFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 419
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 1.178e-25 Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 2 Query: 2 DFLRLINEPVQGG-EGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 238 +FL LINEP +G E NL DQ MPQ+I VTPEE EAI RLEAMGFDRA+VL+VFFACNK+E+LAANYLLDHM+EF+D Sbjct: 309 EFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.593e-22 Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 DFLRLINEPVQGGEGNLG--DQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 238 +FL+L+NEP +G +G++ DQ MP S+ VTPEE+E+IERLEAMGFDRAIV+E F +C++NEELAANYLL+H +FED Sbjct: 288 EFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 4.633e-22 Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 DFLRLINEPVQG--GEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 238 +FL+L+NEP +G GEG++ DQ MP +I VTP E+EAI+RLEAMGFDRA+V+E F AC++NEELAANYLL++ +FED Sbjct: 291 EFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23B_HUMAN (UV excision repair protein RAD23 homolog B OS=Homo sapiens GN=RAD23B PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.066e-14 Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 5 FLRLINEPVQ----------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 214 F++++NEPVQ GG G + + +G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 324 FIQMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 402
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23B_BOVIN (UV excision repair protein RAD23 homolog B OS=Bos taurus GN=RAD23B PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 7.922e-14 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 FLRLINEPVQ----------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 214 F++++NEPVQ GG G + + G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 323 FIQMLNEPVQEAGGQGGGGGGGSGGIAEAGGGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 401
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RHP23_SCHPO (UV excision repair protein rhp23 OS=Schizosaccharomyces pombe GN=rhp23 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.932e-13 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 5 FLRLINEPVQGGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 238 FL+L+ E G EG G+ IQ+T EE E+I+RL +GFDR IV++ + AC+KNEELAANYL +H HE ED Sbjct: 295 FLQLLAE---GAEGESALPSGGIQ---IQITQEESESIDRLCQLGFDRNIVIQAYLACDKNEELAANYLFEHGHESED 366
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23B_RAT (UV excision repair protein RAD23 homolog B OS=Rattus norvegicus GN=Rad23b PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.135e-13 Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 5 FLRLINEPVQ----------------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 214 F++++NEPVQ GG G + + +G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 324 FIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGIAEAGSGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 408
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Match: RD23B_MOUSE (UV excision repair protein RAD23 homolog B OS=Mus musculus GN=Rad23b PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.706e-13 Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 2 Query: 5 FLRLINEPVQ-----------------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 214 F++++NEPVQ GG G + + +G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 324 FIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGGIAEAGSGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 409 The following BLAST results are available for this feature:
BLAST of BQ623723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623723 ID=BQ623723; Name=BQ623723; organism=Citrus sinensis; type=EST; length=476bpback to top |