BQ623841

Overview
NameBQ623841
Unique NameBQ623841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623841 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.621e-13
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 2 
Query:    5 PNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKAILGGTG 136
            PNPGLQITD+ALFANNL S +VE+ TFLDDA VK+LK++LGG+G
Sbjct:  170 PNPGLQITDYALFANNLPSAIVEKVTFLDDAQVKKLKSVLGGSG 213
[Close]
BLAST of BQ623841 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.649e-11
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 
Query:    2 SPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKAILGGTG 136
            S NPGLQI DFALFAN+L ++LV  TTFLD  TVK+LK +LGGTG
Sbjct:  164 SANPGLQILDFALFANSLPTELVVGTTFLDATTVKKLKGVLGGTG 208
The following BLAST results are available for this feature:
BLAST of BQ623841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GL814_ORYSJ4.621e-1375.00Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GL31_ARATH5.649e-1171.11Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00921 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00921 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623841 ID=BQ623841; Name=BQ623841; organism=Citrus sinensis; type=EST; length=288bp
CAGCCCGAATCCTGGACTCCAAATCACCGATTTCGCCTTATTTGCTAACA
ACTTGTCTTCCCAATTGGTGGAGCAGACCACTTTCCTTGACGATGCTACG
GTGAAGAGGCTCAAGGCTATCCTTGGTGGCACCGGCTAGGCTTATTAGTT
ACCACATTCTTCATTTGTAGTTTTGAGTTCTTAATTTCATTTAGTTGCTA
ATGTTTTTGATTGTTGGAATTCACGAGTTAGTATTTTCTGTTCTCACTTC
CCCTATCTTTTCTTCTGAATAAATAAAATTTCTCTCAA
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