BQ623859

Overview
NameBQ623859
Unique NameBQ623859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ623859 vs. ExPASy Swiss-Prot
Match: PLDP1_ARATH (Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 
Query:  138 HNDLQFLGNIIFERLSADHDS*IFELIHCVLILLQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEVSV 353
            H+ + F G   + +LS D            +   QVYVHSK+MI+DD  ALIGSANINDRSLLGSRDSE+ V
Sbjct:  869 HDYISFYGLRAYGKLSEDGP----------VATSQVYVHSKIMIVDDRAALIGSANINDRSLLGSRDSEIGV 930
The following BLAST results are available for this feature:
BLAST of BQ623859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLDP1_ARATH4.498e-1152.78Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00939 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00939 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623859 ID=BQ623859; Name=BQ623859; organism=Citrus sinensis; type=EST; length=670bp
TTAGGGCTTATGGTAGACTTTTTGAGGATGGTCCAGTGGCCACCAGTCAG
GTATTGTCTTTAACCAATGCAAATGCTATATGCATCTGTTGTCAAATCAA
TTCCCTGAGATATTGGCAAATGTTGGTCATACTTTTTCACAATGATCTAC
AATTTCTTGGTAACATAATTTTCGAAAGGTTGAGTGCAGATCATGATTCA
TGAATATTTGAGTTGATTCATTGTGTTCTTATTCTTTTGCAGGTCTATGT
ACATAGTAAAGTTATGATAATTGATGACTCAATTGCTTTGATTGGATCAG
CCAACATCAATGACAGGAGTTTACTTGGTTCAAGAGATTCTGAGGTATCA
GTTGGTTTATATTTATTTATTCTTAGGTGGGAACTTACTGACCTTAAAGT
TAATTAGCTAAAACTGCTAAGGAAATGCATGGAGATCTTTTGACCAGTCC
AAAATCTGATGCTCAGAAATATTAAAATCTTCCATCACTTAAATTTTCCA
TTGATGACATGAGAGTTATTTCAGATTGGAGTACTAATTGAAGACAAAGA
GTCAGTAGATTCATTTATGGGAGGAAAACCATGGAAGGCTGGAAAGTTAT
GTTTGAGTCTTCGGCTCTCGCTTTGGTCTGAACATCTGGTCCTCGTTCAA
GGGAGGGTACGACCTCCACC
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