BQ623899

Overview
NameBQ623899
Unique NameBQ623899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:830..1391. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 1.729e-81
Identity = 143/156 (91.67%), Postives = 152/156 (97.44%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 469
            ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL E+LCGFQF++THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHFSV+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  234 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 4.708e-79
Identity = 138/156 (88.46%), Postives = 148/156 (94.87%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 469
            ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF EH+LSLTEALCGFQFV+THLD RQLLIKS PGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHFSVDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  236 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 3.052e-78
Identity = 138/156 (88.46%), Postives = 148/156 (94.87%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 469
            ITFPGEADEAPDTVTGDIVFVLQQKEHPKF+RKGDDLF +HTLSLTEALCGFQFV+THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  215 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 2.047e-74
Identity = 131/156 (83.97%), Postives = 146/156 (93.59%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 469
            ITF G+ADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLFVEHTLSLTEALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  236 ITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 2.674e-74
Identity = 131/156 (83.97%), Postives = 146/156 (93.59%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 469
            ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLF EHTLSLTEALCGF+FV+THLDGRQLLIKS  GEVVKPDQFKAI DEGMP+YQRPFM+GK+YIHF+V+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  236 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 1.467e-72
Identity = 126/156 (80.77%), Postives = 145/156 (92.95%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 469
            ITF G+ADEAPDTVTGDIVFV+QQKEHPKFKRKG+DLFVEHT+SLTEALCGFQFV+THLD RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  237 ITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.071e-34
Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 427
            ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  231 ITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDST 379          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34
Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 427
            ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V        ++EL E + T
Sbjct:  231 ITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDST 379          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33
Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 427
            ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  231 ITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.753e-33
Identity = 73/157 (46.50%), Postives = 102/157 (64.97%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 466
            ITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  222 ITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
The following BLAST results are available for this feature:
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
DNJH_CUCSA1.729e-8191.67DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO4.708e-7988.46DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO3.052e-7888.46DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH2.047e-7483.97Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU2.674e-7483.97DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH1.467e-7280.77Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_HUMAN2.071e-3447.65DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN3.532e-3447.65DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_MOUSE1.028e-3346.98DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA1_RAT1.753e-3346.50DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00979 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00979 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623899 ID=BQ623899; Name=BQ623899; organism=Citrus sinensis; type=EST; length=562bp
GATTACGTTCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTG
ACATTGTATTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAG
GGTGATGACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTG
TGGCTTTCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCCTCATCA
AATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCCATAAAT
GATGAAGGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTA
CATTCATTTCAGTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCA
AGATGCTGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGAT
ATGGAACTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGA
GGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAG
ATGACGATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCAGCAGTGA
TGATGTGAAGAA
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