BQ623925

Overview
NameBQ623925
Unique NameBQ623925
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length383
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623925 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15
Identity = 38/42 (90.48%), Postives = 42/42 (100.00%), Query Frame = 2
Query:    2 EVYKGLTFATVRGAGHEVPLFQPRRALILFRSFLAGKQLPKS 127
            EVYKGLTFATVRGAGHEVPLF+P+RALILFRSFLAGK+LP+S
Sbjct:  423 EVYKGLTFATVRGAGHEVPLFEPKRALILFRSFLAGKELPRS 464          
BLAST of BQ623925 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.173e-13
Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 2
Query:    2 EVYKGLTFATVRGAGHEVPLFQPRRALILFRSFLAGKQLPKS 127
            EVY+GLTFAT+RGAGHEVP+ QP RAL L RSFLAGK+LP+S
Sbjct:  412 EVYEGLTFATIRGAGHEVPVLQPERALTLLRSFLAGKELPRS 453          
BLAST of BQ623925 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.164e-11
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 2
Query:    2 EVYKGLTFATVRGAGHEVPLFQPRRALILFRSFLAGKQLPKS 127
            EVY+GLTF TVRGAGHEVP FQP+ ALIL RSFLAG +L +S
Sbjct:  422 EVYEGLTFVTVRGAGHEVPFFQPQSALILLRSFLAGNELSRS 463          
BLAST of BQ623925 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.424e-11
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 2
Query:    2 EVYKGLTFATVRGAGHEVPLFQPRRALILFRSFLAGKQLPKS 127
            EVY+GLTF TVRGAGHEVPLF+PR A  LF+ FL GK LPK+
Sbjct:  432 EVYEGLTFVTVRGAGHEVPLFKPRAAFELFKYFLRGKPLPKA 473          
The following BLAST results are available for this feature:
BLAST of BQ623925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
SCP24_ARATH1.017e-1590.48Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP23_ARATH6.173e-1378.57Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP22_ARATH1.164e-1176.19Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP25_ARATH4.424e-1173.81Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_01016 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01016 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623925 ID=BQ623925; Name=BQ623925; organism=Citrus sinensis; type=EST; length=383bp
AGAAGTTTACAAGGGGCTGACCTTTGCTACAGTGAGAGGAGCTGGCCATG
AAGTTCCATTATTTCAGCCCAGAAGGGCTTTAATTCTGTTCAGATCATTC
TTGGCTGGGAAACAATTGCCTAAATCACGACATATTTCTCAAAGATGACG
ACAATTTTAGTACCAACTTACACATCAAAATGATCAGCGAGGCCATTAGA
GTAGGAATGATTCATTCAATTTAGAATTTGTATTACTAGAATTGTTTGAT
TCTATGTTCTAGCCAAAAGCAGAAAGAGATTTCAGATGAAACTGAATTCA
AAATGTGTTGAGCACTCCCTAATGCAAACACAAAAATGAACTATGATTTT
TTTCCTGTACAATGATATACAGAGAACAGCCTC
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