BQ623930

Overview
NameBQ623930
Unique NameBQ623930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length325
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:1159..1483. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623930 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.867e-17
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 3
Query:    3 LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 140
            L+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  344 LNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of BQ623930 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 3
Query:    3 LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 140
            L+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  346 LTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of BQ623930 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 3
Query:    3 LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 140
            L+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  325 LTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of BQ623930 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.586e-14
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 3
Query:    3 LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 140
            LSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  346 LSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of BQ623930 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.136e-13
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 3
Query:    3 LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 140
            L+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  346 LNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of BQ623930 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12
Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 3
Query:    3 LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 140
            LSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  347 LSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
The following BLAST results are available for this feature:
BLAST of BQ623930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DNJH_CUCSA1.867e-1789.13DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO2.980e-1578.26DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO2.980e-1578.26DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH9.586e-1476.09Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU2.136e-1373.91DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH3.084e-1267.39Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_01021 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01021 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623930 ID=BQ623930; Name=BQ623930; organism=Citrus sinensis; type=EST; length=325bp
CACTGAGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGG
ACCTCAGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAAC
CCTGCATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAG
CTCAGGAGGCATACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGA
GTGCAGTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATT
TAGTATTTTCATTGTTTGGGAGAAAAACATTCTCAACATATTTATTTCTC
TGTTATCAGCTTTACAGGTTCTAAT
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