BQ623948

Overview
NameBQ623948
Unique NameBQ623948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 7.263e-83
Identity = 157/191 (82.20%), Postives = 160/191 (83.77%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+MEYF                RA+G               QHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI
Sbjct:  256 GDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 446
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 8.030e-82
Identity = 155/191 (81.15%), Postives = 159/191 (83.25%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+MEYF                RA+G               QHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGLEK QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI
Sbjct:  257 GDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKTQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 447
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.159e-80
Identity = 153/191 (80.10%), Postives = 158/191 (82.72%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+MEYF                RA+G               QHQVRVEIESLFDG DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGL+KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP+KGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTK I
Sbjct:  256 GDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRSLSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPSKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKFI 446
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 7.516e-80
Identity = 151/191 (79.06%), Postives = 159/191 (83.25%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD RVMEYF                +A+G               QHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGL+K+QIDEIVLVGGSTRIPKVQQLLKD+F+GKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI
Sbjct:  255 GDTHLGGEDFDHRVMEYFIKLIKKKHQKDISKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 445
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 295.049 bits (754), Expect = 1.674e-79
Identity = 152/191 (79.58%), Postives = 157/191 (82.20%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+MEYF                RA+G               QHQVRVEIESLFDG DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEK+QI EIVLVGGSTRIPKVQQLL+DYFDGKEPNKGVNPDEAVA+GAAVQG ILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI
Sbjct:  253 GDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAKRALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQIHEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 443
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 2.856e-79
Identity = 152/191 (79.58%), Postives = 157/191 (82.20%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+MEYF                RA+G               QHQVRVEIESLFDG DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEK+QI EIVLVGGSTRIPKVQQLLKDYF+GKEPNKGVNPDEAVA+GAAVQG ILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI
Sbjct:  253 GDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAKRALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQIHEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 443
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 4.871e-79
Identity = 149/191 (78.01%), Postives = 158/191 (82.72%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R+MEYF                +A+G               QHQVRVEIESLFDG+D SEPLTRARFEELNNDLFRKTMGPVKKAM+DAGL+K+QIDEIVLVGGSTRIPKVQQLLKD+F+GKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI
Sbjct:  255 GDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 445
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.124e-78
Identity = 148/191 (77.49%), Postives = 159/191 (83.25%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+MEYF                RA+G               QHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGLEKNQIDEIVLVGGSTRIPKVQQLLK++F+GKEP+KGVNPDEAVA+GAAVQG ILSGEGG+ETK+ILLLDVAPLTLGIETVGGVMTKLI
Sbjct:  256 GDTHLGGEDFDQRLMEYFIKLIKKKHTKDISKDNRALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKNQIDEIVLVGGSTRIPKVQQLLKEFFNGKEPSKGVNPDEAVAFGAAVQGSILSGEGGEETKEILLLDVAPLTLGIETVGGVMTKLI 446
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 4.143e-62
Identity = 121/191 (63.35%), Postives = 145/191 (75.92%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVMEYF                RA+                QHQ +VEIESLFDG DFSE LTRA+FEELN DLFR T+ PV+K +ED+ L+K+ + EIVLVGGSTRIPKVQQL+K++F+GKEP++G+NPDEAVAYGAAVQGG++SGE  ++T +I+LLDV PLT+GIETVGGVMTKLI
Sbjct:  254 GDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLI 442
[Close]
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 4.143e-62
Identity = 121/191 (63.35%), Postives = 145/191 (75.92%), Query Frame = 3 
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVMEYF                RA+                QHQ +VEIESLFDG DFSE LTRA+FEELN DLFR T+ PV+K +ED+ L+K+ + EIVLVGGSTRIPKVQQL+K++F+GKEP++G+NPDEAVAYGAAVQGG++SGE  ++T +I+LLDV PLT+GIETVGGVMTKLI
Sbjct:  254 GDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLI 442
The following BLAST results are available for this feature:
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP5_TOBAC7.263e-8382.20Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP4_TOBAC8.030e-8281.15Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
BIP_SOLLC1.159e-8080.10Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP1_ARATH7.516e-8079.06Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
BIP2_MAIZE1.674e-7979.58Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]
BIP3_MAIZE2.856e-7979.58Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
BIP2_ARATH4.871e-7978.01Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP_SPIOL4.124e-7877.49Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
HSP7C_CAEEL4.143e-6263.35Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP7C_CAEBR4.143e-6263.35Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01039 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01039 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623948 ID=BQ623948; Name=BQ623948; organism=Citrus sinensis; type=EST; length=575bp
ATGGAGACACTCATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAG
TACTTTATTAAATTGATCAAGAAGAAGCATGGAAAGGATATCAGCAAGGA
CAAAAGGGCTATTGGCAAGCTCAGGAGGGAAGCTGAACGTGCTAAGAGAG
CTCTCAGCAGCCAGCACCAGGTCCGTGTTGAAATTGAGTCACTTTTCGAT
GGCATTGACTTCTCCGAGCCACTTACTAGGGCTCGCTTTGAGGAGTTGAA
TAATGACTTGTTCAGAAAGACCATGGGACCTGTGAAGAAGGCCATGGAAG
ATGCTGGATTAGAGAAGAATCAGATTGATGAGATTGTTCTTGTTGGTGGT
AGTACTAGGATTCCCAAGGTTCAACAGCTTCTCAAAGACTATTTTGATGG
TAAAGAGCCTAACAAGGGTGTGAACCCAGATGAGGCAGTTGCTTATGGTG
CTGCTGTACAAGGTGGCATCTTGAGTGGTGAAGGTGGTGATGAAACCAAA
GATATCCTTCTCTTGGATGTGGCTCCACTCACCCTTGGTATCGAGACAGT
TGGTGGGGTGATGACCAAGTTGATC
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