BQ623957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623957 vs. ExPASy Swiss-Prot
Match: RS211_ARATH (40S ribosomal protein S21-1 OS=Arabidopsis thaliana GN=RPS21B PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.040e-29 Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 3 Query: 102 AAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 260 A+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +QQ Sbjct: 30 ASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQQ 82 HSP 2 Score: 51.6026 bits (122), Expect = 7.040e-29 Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 2 Query: 14 MQNEEGQNMDLYIPRKCSATNRLITSKDH 100 M+N+ GQ +LYIPRKCSATNR+ITSKDH Sbjct: 1 MENDAGQVTELYIPRKCSATNRMITSKDH 29
BLAST of BQ623957 vs. ExPASy Swiss-Prot
Match: RS212_ARATH (40S ribosomal protein S21-2 OS=Arabidopsis thaliana GN=RPS21C PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.560e-20 Identity = 45/69 (65.22%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 69 PQTGSSPPRII-----AAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 260 P+ S+ R+I A+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +Q+ Sbjct: 14 PRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQK 82
BLAST of BQ623957 vs. ExPASy Swiss-Prot
Match: RS21_ORYSJ (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica GN=RPS21 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.697e-18 Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 3 Query: 69 PQTGSSPPRII-----AAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 260 P+ S+ RII A+VQINIGHVD +G+Y G+F+TFAL GF+RAQGD DSA+DRLWQK+K EV+QQ Sbjct: 14 PRKCSATNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82
BLAST of BQ623957 vs. ExPASy Swiss-Prot
Match: RS21_MAIZE (40S ribosomal protein S21 OS=Zea mays GN=RPS21 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.367e-17 Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 69 PQTGSSPPRII-----AAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQ 257 P+ S+ RII A+VQINIGH+DA+G+Y G F+TFAL GFVRAQGD DS++DRLWQKKK E++Q Sbjct: 14 PRKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRAQGDADSSLDRLWQKKKAEIKQ 81
BLAST of BQ623957 vs. ExPASy Swiss-Prot
Match: RS21_PECGU (40S ribosomal protein S21 OS=Pectinaria gouldii GN=rps-21 PE=3 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 1.252e-11 Identity = 18/29 (62.07%), Postives = 26/29 (89.66%), Query Frame = 2 Query: 14 MQNEEGQNMDLYIPRKCSATNRLITSKDH 100 MQN++G+ +D+YIPRKCSATN ++ +KDH Sbjct: 1 MQNDQGEIVDVYIPRKCSATNNILAAKDH 29 HSP 2 Score: 42.3578 bits (98), Expect = 1.252e-11 Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 3 Query: 102 AAVQINIGHVDAD-GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKV 245 A+VQIN+ +D G TG+ T+ALCG +R G+ D +++RL K K+ Sbjct: 30 ASVQINMAEIDPQTGRMTGKQITYALCGELRRMGEADDSVNRLAMKDKM 78 The following BLAST results are available for this feature:
BLAST of BQ623957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623957 ID=BQ623957; Name=BQ623957; organism=Citrus sinensis; type=EST; length=455bpback to top |