BQ623969

Overview
NameBQ623969
Unique NameBQ623969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig44 contig Csv1_Contig44:1..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 1.876e-92
Identity = 174/198 (87.88%), Postives = 180/198 (90.91%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYLVGAVS+PKRPFAAIVGGSKVSSKIGVIESLLE CDILLLGGGMIFTFYKAQG+SVGSSLVEE                GV+LLLPSDVVIADKFAPDANSK+VPA+AIPDGWMGLDIGPDSVKTFN+ALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVA VMSHI
Sbjct:  253 ELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNDALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHI 450
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 2.803e-88
Identity = 166/198 (83.84%), Postives = 177/198 (89.39%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYL GAVS+PKRPFAAIVGGSKVSSKIGVIESLLE CDILLLGGGMIFTFYKAQG+SVGSSLVEE                GV+LLLPSDV+IADKFAPDANS+ VPA+AIPDGWMGLDIGPDSVKTFN+ALDTT+T+IWNGPMGVFEFDKFAVGTE+IAKKLA+LS KGVTTIIGGGDSVAAVEKVGVA VMSHI
Sbjct:  250 ELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLPSDVIIADKFAPDANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKFAVGTESIAKKLAELSKKGVTTIIGGGDSVAAVEKVGVADVMSHI 447
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 318.931 bits (816), Expect = 1.177e-86
Identity = 163/198 (82.32%), Postives = 174/198 (87.88%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYLVGAVS+PKRPFAAIVGGSKVSSKIGVIESLLE CDILLLGGGMIFTFYKAQG+SVGSSLVEE                GV+LLLP+DVV+ADKFAPDANSK+VPA+ I DGWMGLDIGPDS+KTFNEALDTT+TVIWNGPMGVFE +KFA GTEAIA KLA+LS KGVTTIIGGGDSVAAVEKVGVA VMSHI
Sbjct:  251 ELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGPDSIKTFNEALDTTQTVIWNGPMGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAVEKVGVAGVMSHI 448
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 2.900e-85
Identity = 160/198 (80.81%), Postives = 173/198 (87.37%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYLVGAVS+PKRPFAAIVGGSKVSSKIGVIESLLE CDILLLGGGMIFTFYKAQG+SVGSSLVEE                GV+LLLP+DVVIADKFA DA+SK+VPA+ IPDGWMGLDIGPDS+KTF+EALDTT+TVIWNGPMGVFEF+KFA GTEAIAKKL ++S KG TTIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  206 ELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDLATSLLAKAKEKGVSLLLPTDVVIADKFAADADSKIVPASGIPDGWMGLDIGPDSIKTFSEALDTTQTVIWNGPMGVFEFEKFAAGTEAIAKKLEEISKKGATTIIGGGDSVAAVEKVGVAEAMSHI 403
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 7.144e-84
Identity = 158/198 (79.80%), Postives = 172/198 (86.87%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYLVGAV++P++PFAAIVGGSKVSSKIGVIESLLE  D+LLLGGGMIFTFYKAQG +VGSSLVEE                GV+LLLP+DVVIADKFA DANSKVVPA+ IPDGWMGLDIGPD++K+F  ALDTTKTVIWNGPMGVFEFDKFA GTEAIAKKLA+LSGKGVTTIIGGGDSVAAVEKVG+A  MSHI
Sbjct:  179 ELDYLVGAVANPQKPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDLATSLMEKAKAKGVSLLLPTDVVIADKFAADANSKVVPASEIPDGWMGLDIGPDAIKSFGSALDTTKTVIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAEKMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 3.920e-82
Identity = 153/198 (77.27%), Postives = 170/198 (85.86%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYLVGAV++PK+PFAAIVGGSKVSSKIGVIESLL   DIL+LGGGMIFTFYKAQG++VG SLVEE                GV LLLP+DVV+ADKFA DA SK+VPATAIPDGWMGLD+GPDS+KTF EALDTTKTVIWNGPMGVFEF+KFA GT+AIAK+LA+L+GKGVTTIIGGGDSVAAVEK G+A  MSHI
Sbjct:  179 ELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.753e-74
Identity = 142/198 (71.72%), Postives = 157/198 (79.29%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL  A+ +P+RP AAIVGGSKVSSKIGVIE+LL+ CD LL+GGGMIFTFYKAQG+SVG SLVEE                GV LLLP DVV+ADKFAPDAN+K V   AIPDGWMGLDIGP+SVK F EAL   ++VIWNGPMGVFEFD+FAVGTEAIA+ LA L+ KG TTIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  179 ELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 5.673e-73
Identity = 141/198 (71.21%), Postives = 156/198 (78.79%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL  A+ +P+RP AAIVGGSKVSSKIGVIE+LL+ CD LL+GGGMIFTFYKAQG+SVG SLVEE                GV LLLP DVV+ADKFAPDAN+K V   AIPDGWMGLDIGP+SVK F  AL   ++VIWNGPMGVFEFD+FAVGTEAIA+ LA L+ KG TTIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  179 ELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEGALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 9.677e-73
Identity = 138/198 (69.70%), Postives = 155/198 (78.28%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL GAV  PKRP AAIVGGSKVSSKIGV+E+L++ CD +L+GGGMIFTFYKA+G+SVG SLVEE                GV LLLP+DVV+AD FAPDANS+V   TAIPDGWMGLDIGPD+VK F +AL   +TVIWNGPMGVFEF+KFA GT AIA  LA+LSGKG  TIIGGGDSVAAVEK G+A  MSHI
Sbjct:  179 ELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVVLADNFAPDANSQVADVTAIPDGWMGLDIGPDAVKVFQDALGDCQTVIWNGPMGVFEFEKFATGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLADKMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 9.677e-73
Identity = 141/198 (71.21%), Postives = 156/198 (78.79%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL  A+ +P+RP AAIVGGSKVSSKIGVIE+LLE  D LLLGGGMIFTFYKA+G++VG SLVEE                GV LLLP+DVV+AD FA DAN++ V   +IPDGWMGLDIGPD+VKTF EAL   KTVIWNGPMGVFEFDKFAVGTEAIA  LA L+GKG +TIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  184 ELQYLQSAIENPQRPLAAIVGGSKVSSKIGVIETLLEKVDKLLLGGGMIFTFYKARGLNVGKSLVEEDKLELARTLEAKAKERGVALLLPTDVVVADAFAADANAQTVSVESIPDGWMGLDIGPDAVKTFQEALSDCKTVIWNGPMGVFEFDKFAVGTEAIAHSLAGLTGKGASTIIGGGDSVAAVEKVGVAEQMSHI 381
The following BLAST results are available for this feature:
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKH_TOBAC1.876e-9287.88Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_WHEAT2.803e-8883.84Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_ARATH1.177e-8682.32Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGKH_SPIOL2.900e-8580.81Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKY_TOBAC7.144e-8479.80Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKY_WHEAT3.920e-8277.27Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGK_SYNE78.753e-7471.72Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_SYNP65.673e-7371.21Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNPX9.677e-7369.70Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP49.677e-7371.21Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01060 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01060 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623969 ID=BQ623969; Name=BQ623969; organism=Citrus sinensis; type=EST; length=596bp
GGAACTGGACTACCTTGTTGGGGCGGTTTCAAGCCCAAAGAGGCCATTTG
CTGCCATTGTGGGCGGTTCAAAGGTCTCATCCAAGATTGGAGTTATTGAG
TCACTCCTAGAAACATGTGATATCCTACTCCTTGGTGGAGGAATGATCTT
CACATTTTACAAGGCACAAGGAATCTCAGTGGGTTCATCTCTCGTTGAGG
AGGATAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAA
GGTGTTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGC
TCCTGACGCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCT
GGATGGGATTGGATATTGGACCAGATTCTGTTAAGACATTCAACGAAGCT
TTAGATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGA
GTTTGACAAGTTCGCTGTTGGAACAGAGGCAATCGCAAAGAAGCTAGCAG
ACCTCAGTGGCAAGGGCGTAACAACAATCATTGGAGGTGGAGACTCTGTA
GCCGCCGTTGAAAAAGTTGGAGTTGCCCGTGTCATGAGCCACATAT
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