BQ623977

Overview
NameBQ623977
Unique NameBQ623977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3765 contig Csv1_Contig3765:341..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 2.595e-65
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = 2
Query:    2 DDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVRS 475
            DDFHNPT+P GTKAPR+PWHDLHCR+DGPAAYDVLINFEQRWRKAT+  E + + K  +HW+DD LI+IGRISWILSP      +GT+I+P DD  V VSKEDDPENWHVQIFRSIDSGSVKGFPK  ++ + Q L CAK +V+DKSIQTAYIQ +RS
Sbjct:  421 DDFHNPTFPAGTKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGFPKYEDEAEAQHLECAKRLVVDKSIQTAYIQTIRS 578          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 3.654e-35
Identity = 82/159 (51.57%), Postives = 102/159 (64.15%), Query Frame = 2
Query:    2 DDFHNPTYPIGTKA-PREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVRS 475
            DDFHNPT+       PREPWHDLH ++DGPAAYDVL NFE+RW KA K + +  KFK      DD L++I RI  IL         G +  P          E+DPE WHVQIFRSIDS SVKGFPK  +D   ++L+C K+V+ID SI TAY++A+R+
Sbjct:  531 DDFHNPTFTGNLSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPSGIK-KFKLPI---DDALLRIDRIPDIL---------GVSDTP-------TVSENDPEAWHVQIFRSIDSNSVKGFPKDPKDATCKNLVCGKNVLIDMSIHTAYVKAIRA 669          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 9.001e-34
Identity = 75/159 (47.17%), Postives = 100/159 (62.89%), Query Frame = 2
Query:    2 DDFHNPTY-PIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVRS 475
            DDFHNP +       PREPWHDLH ++DGPAAYDVL NFE+RW KA+K   +  K K  S   DD L++I RI  I+    +   N                ++DPE+WHVQ+FRSIDS SVKGFPK  ++   ++L+C K+++ID SI  AY++A+RS
Sbjct:  417 DDFHNPNFVTTADDGPREPWHDLHSKIDGPAAYDVLANFEERWMKASKPRGIG-KLKSSS---DDSLLRIDRIPDIVGLSEASSAN----------------DNDPESWHVQVFRSIDSSSVKGFPKDPKEATGRNLLCGKNILIDMSIHAAYVKAIRS 555          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.535e-33
Identity = 72/159 (45.28%), Postives = 99/159 (62.26%), Query Frame = 2
Query:    2 DDFHNPTY-PIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVRS 475
            DDFHNP +       PREPWHDLH ++DGPAAYDVL NFE+RW KA+K   +     R+    DD L+++ RI  I+    +   N                ++DPE+WHVQ+FRSIDS SVKGFPK  ++   ++L+C K+++ID SI  AY++A+RS
Sbjct:  424 DDFHNPNFVTTADDGPREPWHDLHSKIDGPAAYDVLANFEERWMKASKPRGIG----RLRTSSDDSLLRLDRIPDIMGLSEASSAN----------------DNDPESWHVQVFRSIDSSSVKGFPKDPKEATGRNLLCGKNILIDMSIHAAYVKAIRS 562          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 1.100e-31
Identity = 73/163 (44.79%), Postives = 100/163 (61.35%), Query Frame = 2
Query:    2 DDFHNPTYPIGTK--APREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWR---DDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVRS 475
            DDFHNP + + T+   PREPWHDLH ++DGPAAYDVL NFE+RW        +  K + +   R   DD L++I RI  I+    +   N                ++DPE+WHVQ+FRSIDS SVKGFPK  E+   ++L+C K+++ID SI  AY++A+RS
Sbjct:  415 DDFHNPNF-VTTEDVGPREPWHDLHSKIDGPAAYDVLANFEERW--------MASKPRGIGKGRTSFDDSLLRINRIPDIMGLSEASSAN----------------DNDPESWHVQVFRSIDSTSVKGFPKDPEEATGRNLLCGKNILIDMSIHAAYVKAIRS 552          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 4.050e-26
Identity = 68/158 (43.04%), Postives = 91/158 (57.59%), Query Frame = 2
Query:    5 DFHNPTYPIGTKA-PREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVRS 475
            D+HNPT+       PREPWHDLH ++DGPAAYDVL NFE+RW KA K      +  ++    DD L++I RI                      +++RV   D P      IFRSIDS SVKGFPK  +    ++L+C K+V+ID SI TAY++A+R+
Sbjct:  493 DYHNPTFTGNVSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAK----PHRINKLKTSYDDALLRIDRIP---------------------DILRVL--DAPT-----IFRSIDSNSVKGFPKDPKYATSKNLVCGKNVLIDMSIHTAYVKAIRA 618          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 9.022e-26
Identity = 67/160 (41.88%), Postives = 83/160 (51.88%), Query Frame = 2
Query:    2 DDFHNPTYPIG--TKA-PREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVR 472
            DDFH P +P G  TK  PREPWHD+H RL+GP A+DVL NFEQRWRK                   D L+    +  I+ P                    V   DD E W+VQ+FRSID G+  GFP++ ED     L+   D +ID+SIQ AYI A+R
Sbjct:  382 DDFHQPNFPDGAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRK---------------QGGKDVLVNFRELDDIIIPPSP-----------------VMHLDDSETWNVQLFRSIDEGAAFGFPETPEDAAKAGLVSGXDNIIDRSIQDAYIHAIR 509          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.539e-25
Identity = 64/160 (40.00%), Postives = 85/160 (53.12%), Query Frame = 2
Query:    2 DDFHNPTYP---IGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVR 472
            +DFH P +    I    PREPWHD+HC+LDGPAA+DVL NFEQRW K                    YLI + +++ I  P L                  + + D+ E W VQ+FRSID G+V+GFP+   +     LI  KD VI++SIQ AY+ A+R
Sbjct:  389 NDFHQPNFDGASIKKGGPREPWHDIHCKLDGPAAWDVLYNFEQRWMKQGSGRR--------------YLISMAQLAEITVPPLP-----------------IVQPDNEEGWTVQVFRSIDDGAVEGFPEDPREAASIGLISGKDNVIERSIQDAYVNAIR 517          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.539e-25
Identity = 65/160 (40.62%), Postives = 84/160 (52.50%), Query Frame = 2
Query:    2 DDFHNPTYP---IGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVR 472
            DDFH P +    I    PREPWHD+H RL+GP A+DVL NFEQRWRK                   D LI++  +  ++ P                    V   DD E W+VQ+FRSID G+  GFP++ ED  +  L+  KD +ID+SIQ AYI A+R
Sbjct:  382 DDFHQPNFAGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRK---------------QGGKDLLIQLRELEDVIIPPSP-----------------VMYPDDFEAWNVQLFRSIDGGAAFGFPETPEDAPEAGLVSGKDNIIDRSIQDAYIHAIR 509          
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.010e-25
Identity = 68/160 (42.50%), Postives = 86/160 (53.75%), Query Frame = 2
Query:    2 DDFHNPTYP---IGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAVR 472
            DDFH P +P   I    PREPWHD+H R++GP A+DVL NFEQRWRK                 +D           IL+P   L+     I+P       V+  DD E W+VQ+FRSID G+  GFP + ED     L+  KD +ID+SIQ AYI A+R
Sbjct:  383 DDFHQPNFPGAAITKGGPREPWHDIHSRVEGPIAWDVLFNFEQRWRK--------------QGGKD-----------ILAPLRELED---VIIPPSP----VTFPDDHETWNVQLFRSIDGGAAFGFPDTPEDAAKAGLVSGKDNIIDRSIQDAYIHAIR 510          
The following BLAST results are available for this feature:
BLAST of BQ623977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PLDD1_ARATH2.595e-6571.52Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDB1_ARATH3.654e-3551.57Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH9.001e-3447.17Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH1.535e-3345.28Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH1.100e-3144.79Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDB2_ARATH4.050e-2643.04Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDA1_TOBAC9.022e-2641.88Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDZ1_ARATH1.539e-2540.00Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDA1_RICCO1.539e-2540.63Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_VIGUN2.010e-2542.50Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01068 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01068 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623977 ID=BQ623977; Name=BQ623977; organism=Citrus sinensis; type=EST; length=477bp
GGATGATTTTCATAATCCTACATATCCTATTGGAACCAAGGCTCCAAGGG
AACCATGGCATGATTTGCATTGCAGATTAGATGGGCCTGCTGCATATGAT
GTTCTTATCAACTTTGAGCAGCGTTGGAGAAAAGCAACCAAGTTGACAGA
GTTAACTTTCAAGTTCAAAAGGGTCTCTCATTGGCGTGATGATTATCTGA
TTAAGATAGGGCGCATCTCGTGGATACTAAGTCCTGAGCTATCTCTTAAA
ACGAATGGAACAACAATAGTTCCAAGGGATGATAATGTAGTACGTGTTTC
AAAGGAGGATGATCCTGAAAACTGGCATGTTCAGATTTTCCGGTCCATAG
ACTCAGGATCAGTGAAAGGATTTCCAAAATCTATTGAGGACATTGATGAC
CAGAGCCTTATCTGTGCAAAAGATGTGGTGATAGATAAGAGCATTCAAAC
CGCTTATATCCAAGCAGTCAGATCTGC
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