BQ623992

Overview
NameBQ623992
Unique NameBQ623992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9377 contig Csv1_Contig9377:1399..1876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.415e-34
Identity = 71/86 (82.56%), Postives = 81/86 (94.19%), Query Frame = 1
Query:    1 QVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 258
            QVQL+RAKQ+TKSAILMNLESRMV SEDIGRQ+LTYGER PVEHFLK ++ V+AKDIASV QKL+SSPLTMASYGDV+++PSYDAV
Sbjct:  412 QVQLNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAV 497          
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.211e-29
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = 1
Query:    1 QVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 258
            Q  LDRAK +TKSAILMNLESRM+ +EDIGRQ+LTYGERKPV+ FLKTV+ +T KDIA    K+++ PLTMA++GDV+NVPSYD+V
Sbjct:  409 QKHLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNVPSYDSV 494          
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.828e-28
Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = 1
Query:    1 QVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 258
            Q  LDRAK +TKSA+LMNLESRM+ +EDIGRQ+LTYGERKPV+ FLK+V+ +T KDIA    K++S PLTM S+GDV+ VPSYD +
Sbjct:  413 QAHLDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYDTI 498          
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Match: MPPA_RAT (Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus GN=Pmpca PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.752e-11
Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    4 VQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 258
            V+L+RAK    S ++MNLESR V+ ED+GRQVL    RK        +  V  +DI  VA K+L     +A+ GD+ ++P+Y+ +
Sbjct:  421 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHI 505          
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Match: MPPA_MOUSE (Mitochondrial-processing peptidase subunit alpha OS=Mus musculus GN=Pmpca PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.752e-11
Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    4 VQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 258
            V+L+RAK    S ++MNLESR V+ ED+GRQVL    RK        +  V  +DI  VA K+L     +A+ GD+ ++P+Y+ +
Sbjct:  421 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHI 505          
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Match: MPPA_PONAB (Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii GN=PMPCA PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 4.900e-11
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    4 VQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 258
            V+L+RAK    S ++MNLESR V+ ED+GRQVL    RK        +  V  +D+  VA K+L     +A+ GD+ ++P+Y+ +
Sbjct:  422 VELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHI 506          
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Match: MPPA_HUMAN (Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens GN=PMPCA PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 4.900e-11
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    4 VQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 258
            V+L+RAK    S ++MNLESR V+ ED+GRQVL    RK        +  V  +D+  VA K+L     +A+ GD+ ++P+Y+ +
Sbjct:  422 VELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHI 506          
The following BLAST results are available for this feature:
BLAST of BQ623992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MPPA_SOLTU2.415e-3482.56Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA2_ARATH5.211e-2969.77Probable mitochondrial-processing peptidase subuni... [more]
MPPA1_ARATH9.828e-2866.28Probable mitochondrial-processing peptidase subuni... [more]
MPPA_RAT3.752e-1140.00Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_MOUSE3.752e-1140.00Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_PONAB4.900e-1138.82Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_HUMAN4.900e-1138.82Mitochondrial-processing peptidase subunit alpha O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_01083 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01083 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623992 ID=BQ623992; Name=BQ623992; organism=Citrus sinensis; type=EST; length=478bp
CAAGTACAGCTAGACCGCGCCAAACAGTCAACCAAGTCAGCTATTTTGAT
GAATTTGGAATCAAGAATGGTTGTTTCCGAAGACATAGGTAGACAAGTTC
TGACATATGGTGAGAGGAAACCCGTGGAGCATTTCTTGAAGACTGTGGAA
GGAGTTACAGCAAAGGATATTGCTTCCGTAGCACAGAAGCTTCTTTCATC
TCCTCTCACAATGGCATCATATGGAGATGTCATCAATGTCCCAAGCTATG
ATGCAGTCAGCAGCAAGTTCAAGTCAAAATAAAATTGATTTTTTTTCCTT
TTTGGTATCAAACTGGGCAGGCTCCTTACCCGTTGTCTATATTGTTGTGC
ATCTGCATTCCGTTGAAGCTCTTTTCCGGTCAACTGCAGTTCAAAATAAG
AGATTTTCATGACACTCCCATTCTTATGAATAATTTGGGTTTTAAGCAAG
CAGCAGTTTTAAATATGATGCTGTATTG
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