BQ624000

Overview
NameBQ624000
Unique NameBQ624000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig46 contig Csv1_Contig46:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: CKI2_SCHPO (Casein kinase I homolog 2 OS=Schizosaccharomyces pombe GN=cki2 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32
Identity = 84/236 (35.59%), Postives = 126/236 (53.39%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDN---KSFLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGLLGPNPAIRP-------INT----EGAQKIIYQVGQKRGR----LNVEEEDDGQPRKKGRLGVPATQWISIYNARLP 655
            H K  V+ D+KP+NFL+G+PS+     +++VD G+A  +RD  T QH+ Y +R  +  GT RY S++ HLGR  SRRDDLESL +  ++  +G LPWQG +  N   K   + +KK +TS   LC   P    +++  V +++FDEEP+Y+ L  LF+ +L  N            +N     E +      V  KR +    LNV + DD + +K   L     ++ S Y  R P
Sbjct:  123 HEKNLVYRDIKPDNFLIGRPSSRNANMVYMVDFGMAKYYRDPKTKQHIPYSERKSL-SGTARYMSINTHLGREQSRRDDLESLGHVFMYFLRGSLPWQGLKAANNKHKYEKISEKKQSTSISELCAGFPNEFSKYMTYVRSLEFDEEPDYAFLQELFDDVLRANGDTNDGVYDWMLLNDGKGWESSSSHFSVVAMKRRKNYLGLNVVQNDDSR-KKNSTLQTQNMRFKSSYGVRGP 356          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1E_MOUSE (Casein kinase I isoform epsilon OS=Mus musculus GN=Csnk1e PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1E_HUMAN (Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1E_CHICK (Casein kinase I isoform epsilon OS=Gallus gallus GN=CSNK1E PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1D_XENTR (Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1D_XENLA (Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1D_RAT (Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1D_PONAB (Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1D_MOUSE (Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Match: KC1D_HUMAN (Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30
Identity = 68/160 (42.50%), Postives = 100/160 (62.50%), Query Frame = 2
Query:    2 HSKGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKS---FLVCKKKMATSPEMLCCFCPPALKQFLEIVVNMKFDEEPNYSKLISLFEGL 472
            HSK ++H DVKP+NFL+G     +   ++++D GLA K+RD+ T QH+ Y +  ++  GT RYAS++ HLG   SRRDDLESL Y L++ + G LPWQG +   K      + +KKM+T  E+LC   P     +L    +++FD++P+YS L  LF  L
Sbjct:  120 HSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276          
The following BLAST results are available for this feature:
BLAST of BQ624000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CKI2_SCHPO2.369e-3235.59Casein kinase I homolog 2 OS=Schizosaccharomyces p... [more]
KC1E_MOUSE1.698e-3042.50Casein kinase I isoform epsilon OS=Mus musculus GN... [more]
KC1E_HUMAN1.698e-3042.50Casein kinase I isoform epsilon OS=Homo sapiens GN... [more]
KC1E_CHICK1.698e-3042.50Casein kinase I isoform epsilon OS=Gallus gallus G... [more]
KC1D_XENTR2.218e-3042.50Casein kinase I isoform delta OS=Xenopus tropicali... [more]
KC1D_XENLA2.218e-3042.50Casein kinase I isoform delta OS=Xenopus laevis GN... [more]
KC1D_RAT2.218e-3042.50Casein kinase I isoform delta OS=Rattus norvegicus... [more]
KC1D_PONAB2.218e-3042.50Casein kinase I isoform delta OS=Pongo abelii GN=C... [more]
KC1D_MOUSE2.218e-3042.50Casein kinase I isoform delta OS=Mus musculus GN=C... [more]
KC1D_HUMAN2.218e-3042.50Casein kinase I isoform delta OS=Homo sapiens GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01091 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01091 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624000 ID=BQ624000; Name=BQ624000; organism=Citrus sinensis; type=EST; length=718bp
GCATTCAAAAGGTTATGTGCATGGAGATGTAAAACCTGAGAATTTTTTAC
TTGGTCAGCCATCTACACCACAAGAGAAGAAGTTGTTTCTAGTTGACCTA
GGATTAGCAACAAAGTGGAGAGACAGCAGTACTGGACAGCATGTTGAATA
TGATCAACGTCCTGATATGTTTAGAGGAACTGTTCGATATGCTAGTGTTC
ATGCGCACTTGGGAAGAACTGCTAGTAGAAGAGATGATCTTGAGTCACTT
GCATATACCTTGATATTCCTTCATAAAGGAAGATTACCGTGGCAAGGCTA
CCAGGGCGATAATAAATCCTTCCTAGTTTGTAAAAAGAAGATGGCTACTT
CTCCGGAAATGCTTTGCTGTTTCTGCCCTCCGGCTTTAAAACAGTTTCTT
GAGATTGTGGTGAACATGAAATTTGATGAGGAGCCCAATTATTCCAAGTT
AATATCTTTATTTGAGGGTTTGCTCGGACCAAATCCGGCGATAAGGCCAA
TAAATACTGAGGGTGCTCAAAAGATTATCTATCAAGTTGGTCAAAAACGG
GGTAGGCTGAATGTTGAGGAGGAAGATGATGGGCAACCAAGGAAGAAGGG
TCGTCTGGGAGTGCCCGCCACACAATGGATTTCTATTTACAATGCTAGGC
TACCCATGAAACAGAGGTACCACTATAATGTCGCTGATGCAAGGGTGGCT
CAACATATTGAGAGAGGA
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