BQ624003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 6.072e-45 Identity = 85/96 (88.54%), Postives = 91/96 (94.79%), Query Frame = 2 Query: 2 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 289 ESH+A TEFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTT EK +++G+LKA Sbjct: 294 ESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 173.326 bits (438), Expect = 3.332e-43 Identity = 80/93 (86.02%), Postives = 89/93 (95.70%), Query Frame = 2 Query: 2 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 280 E+HSAMTE+DRTEKDITPMGGFPHYG+V EDYL+IKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKFID +S GHGRFQT+QEKAK+YGR Sbjct: 294 ETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGR 386
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 166.777 bits (421), Expect = 3.118e-41 Identity = 76/94 (80.85%), Postives = 88/94 (93.62%), Query Frame = 2 Query: 2 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 283 E+H+AMTE+DRTEKD+TPMGGFPHYG+V +DYL+IKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKFIDT+S FGHGRFQT+ EK ++Y R+ Sbjct: 294 EAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRV 387
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 6.963e-33 Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 2 Query: 8 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 286 ++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R ALE+IKLKFIDTSSK GHGRFQT +K + G LK Sbjct: 301 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 2.476e-30 Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 2 Query: 20 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 286 T++D TEK + PMGGFPHYG+VN+D+++I+GCCVG KKR +TLR+SL+ QT R A E+I LK+IDTSSKFGHGRFQT EK + G+LK Sbjct: 302 TDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 390
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.224e-30 Identity = 59/96 (61.46%), Postives = 78/96 (81.25%), Query Frame = 2 Query: 8 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA*F 295 ++ TEFD T+K ITPMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+I LK+IDTSSK GHGRFQTT EK + G+LK F Sbjct: 298 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDF 393
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.576e-29 Identity = 58/96 (60.42%), Postives = 77/96 (80.21%), Query Frame = 2 Query: 8 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA*F 295 ++ TEFD T+K I PMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+I LK+IDTSSK GHGRFQTT EK + G+LK F Sbjct: 298 NNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDF 393
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 3.576e-29 Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = 2 Query: 8 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 286 ++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR ALE I+LKFIDT+SKFGHGRFQT QEK + G K Sbjct: 301 NNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 1.775e-28 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2 Query: 8 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 286 ++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A+E I+LKFIDT+SKFGHGRFQT QEK + G K Sbjct: 301 NNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 3.954e-28 Identity = 57/93 (61.29%), Postives = 74/93 (79.57%), Query Frame = 2 Query: 8 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 286 ++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 301 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393 The following BLAST results are available for this feature:
BLAST of BQ624003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ624003 ID=BQ624003; Name=BQ624003; organism=Citrus sinensis; type=EST; length=304bpback to top |