BQ624064

Overview
NameBQ624064
Unique NameBQ624064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.298e-79
Identity = 137/148 (92.57%), Postives = 146/148 (98.65%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 484
            MASKRILKEL+DLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVF+VTIHFPPDYPFKPPKVAF+TKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM KTDK KYES+ARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.214e-79
Identity = 136/148 (91.89%), Postives = 146/148 (98.65%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 484
            MASKRILKEL+DLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVF+VTIHFPPDYPFKPPKVAF+TKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM KTDK KYES+AR+WTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 2.892e-79
Identity = 135/148 (91.22%), Postives = 146/148 (98.65%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 484
            MASKRILKEL+DLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVF+VTIHFPPDYPFKPPKVAF+TKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM KTD+ KYES+ARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 8.413e-79
Identity = 135/148 (91.22%), Postives = 145/148 (97.97%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 484
            MASKRILKEL+DLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPYAGGVF+V+IHFPPDYPFKPPKVAF+TKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM KTD+ KYE++ARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 7.122e-78
Identity = 133/148 (89.86%), Postives = 145/148 (97.97%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 484
            MASKRILKEL+DLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPY+GGVF+VTIHFPPDYPFKPPKVAF+TKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM KTD+ KYE++AR+WTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 2.072e-77
Identity = 132/148 (89.19%), Postives = 146/148 (98.65%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 484
            MASKRILKEL+DLQ+DPP++CSAGPVAEDMFHWQATI+GP +SPYAGGVF+V+IHFPPDYPFKPPKV+FKTKV+HPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM KTD++KYES+ARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.308e-75
Identity = 127/147 (86.39%), Postives = 140/147 (95.24%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 481
            MA++RILKEL++LQRDPP SCSAGP  EDMFHWQATI+GPN+SPY+GGVF+V IHFPPDYPFKPPKV F+TKVFHPNINSNGNICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+ KTDKTKYE+ ARSWTQKYA+
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.257e-74
Identity = 128/148 (86.49%), Postives = 140/148 (94.59%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 484
            MASKRI KELRDLQRDPP SCSAGP  +DMF WQATI+GP DSP+AGGVF+VTIHFPPDYPFKPPKVAF+TKV+HPNINSNG+ICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+ KTD+ KYES+A+SWTQKYAMG
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 5.116e-68
Identity = 113/146 (77.40%), Postives = 135/146 (92.47%), Query Frame = 2
Query:   44 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 481
            +SKRI KEL DL+RDPPTSCSAGPV +D++HWQA+I+GP DSPYAGGVF ++IHFP DYPFKPPK++F TK++HPNIN+NGNICLDILK+QWSPALT+SKVLLSICSLLTD NPDDPLVPEIAH+ KTD+ KYE++AR WT+KYA+
Sbjct:    3 SSKRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYAV 148          
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 5.116e-68
Identity = 117/147 (79.59%), Postives = 127/147 (86.39%), Query Frame = 2
Query:   41 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 481
            MA KRI KEL DLQRDPP  CSAGPV +D+FHWQATI+GPNDSPY GGVF +TIHFP DYPFKPPKVAF TK++HPNINSNG+ICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVPEIAH  K D+ KY   AR WTQKYAM
Sbjct:    1 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKYAM 147          
The following BLAST results are available for this feature:
BLAST of BQ624064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
UBC10_ARATH1.298e-7992.57Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC9_ARATH2.214e-7991.89SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC28_ARATH2.892e-7991.22Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC4_SOLLC8.413e-7991.22Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC8_ARATH7.122e-7889.86Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC11_ARATH2.072e-7789.19Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC29_ARATH3.308e-7586.39Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC30_ARATH1.257e-7486.49Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC4_YEAST5.116e-6877.40Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces... [more]
UB2D4_HUMAN5.116e-6879.59Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_01155 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01155 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624064 ID=BQ624064; Name=BQ624064; organism=Citrus sinensis; type=EST; length=579bp
GTTCCTCTTGAATCATCTGAATACAACTGCCACTGCTTTGATGGCATCAA
AGAGAATTTTGAAGGAGCTCAGGGACTTGCAGAGGGATCCACCAACTTCA
TGCAGTGCAGGCCCTGTGGCTGAGGATATGTTCCACTGGCAAGCAACCAT
CATCGGTCCAAATGATAGTCCCTACGCTGGAGGTGTGTTCGTTGTAACCA
TCCATTTCCCTCCTGATTATCCCTTCAAACCTCCCAAGGTTGCTTTCAAA
ACCAAAGTCTTCCATCCGAATATTAACAGCAACGGCAATATTTGCTTGGA
CATACTCAAAGAACAGTGGAGCCCTGCACTCACCATATCCAAGGTGTTGC
TCTCTATATGTTCATTGCTAACGGATCCAAATCCTGATGATCCTCTTGTT
CCAGAGATTGCTCATATGTGCAAGACAGACAAAACCAAATACGAGTCATC
GGCACGAAGCTGGACACAAAAATATGCCATGGGCTAACCCTGATGGCAAT
ATTAATATTTGAAAATTTTCCATCATCAAAAGATTCCTGTTACCTTGCTC
AACTATAGAGAGGGCTCAAATCTTGCTAT
back to top