BQ624076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_SOLLC (DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 3.683e-75 Identity = 140/150 (93.33%), Postives = 144/150 (96.00%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 452 NSEGATDEER RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH+QYLFLEKLQTNLRKVIKGVGGL+HEQWRSF NEKKTVDAKNFLDGDLIESFLDLSR RM+EISK M+V VEEL KRVEELTRLH Sbjct: 941 NSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRLH 1090
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_SOLCE (DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 3.683e-75 Identity = 140/150 (93.33%), Postives = 144/150 (96.00%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 452 NSEGATDEER RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH+QYLFLEKLQTNLRKVIKGVGGL+HEQWRSF NEKKTVDAKNFLDGDLIESFLDLSR RM+EISK M+V VEEL KRVEELTRLH Sbjct: 946 NSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRLH 1095
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1A_ARATH (DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 1.185e-73 Identity = 133/150 (88.67%), Postives = 145/150 (96.67%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 452 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVIKGVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKRVEELTRLH Sbjct: 939 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1088
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1B_ARATH (DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=1 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 2.731e-70 Identity = 127/150 (84.67%), Postives = 142/150 (94.67%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 452 N+EGATDEER R+EVVGEYH+GEFVNRFRHGSLVM+LPDSD+GQIPTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVIKGVGGL+HEQWRSFNNEK+T +AK +LDGDLIESFLDLSR +M+EISK M+V VEELCKRVEELTRLH Sbjct: 939 NNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQIPTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEAKGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1088
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_DICDI (DNA damage-binding protein 1 OS=Dictyostelium discoideum GN=repE PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.748e-36 Identity = 69/146 (47.26%), Postives = 102/146 (69.86%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 440 N++ + ER L+ VG YH+GE +N RHGSLV RLPDSD IPT+++ +VNG IGV+AS+ E ++F KLQ L +V++GVGG +HE WR+F+N+ T+D+KNF+DGDLIE+FLDL + + ++ ++ +R+E L Sbjct: 1032 NNDSTNELERELLDSVGHYHIGESINSMRHGSLV-RLPDSDQPIIPTILYASVNGSIGVVASISEEDFIFFSKLQKGLNQVVRGVGGFSHETWRAFSNDHHTIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDAFRRIESL 1176
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_XENLA (DNA damage-binding protein 1 OS=Xenopus laevis GN=ddb1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.849e-34 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 452 +S TDEER L+ VG +HLGEFVN F HGSLVM+ L ++ +V+FGTVNG+IG++ SL Y L +Q L KVIK VG + H WRSF+ E+KT A F+DGDLIESFLD+SR +M E+ + + +V++L K VEELTR+H Sbjct: 980 DSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSPPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRETTVDDLIKVVEELTRIH 1140
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_CHICK (DNA damage-binding protein 1 OS=Gallus gallus GN=DDB1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.154e-34 Identity = 79/161 (49.07%), Postives = 103/161 (63.98%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 452 +S TDEER L+ VG HLGEFVN F HGSLVM+ L ++ +V+FGTVNG+IG++ SL Y L +Q L KVIK VG + H WRSF+ E+KT A F+DGDLIESFLD+SR +M E+ + + +V++L K VEELTR+H Sbjct: 980 DSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1140
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_PONAB (DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 5.380e-34 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 452 +S TDEER L+ VG +HLGEFVN F HGSLVM+ L ++ +V+FGTVNG+IG++ SL Y L +Q L KVIK VG + H WRSF+ E+KT A F+DGDLIESFLD+SR +M E+ + + ++L K VEELTR+H Sbjct: 980 DSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_MOUSE (DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 5.380e-34 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 452 +S TDEER L+ VG +HLGEFVN F HGSLVM+ L ++ +V+FGTVNG+IG++ SL Y L +Q L KVIK VG + H WRSF+ E+KT A F+DGDLIESFLD+SR +M E+ + + ++L K VEELTR+H Sbjct: 980 DSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Match: DDB1_HUMAN (DNA damage-binding protein 1 OS=Homo sapiens GN=DDB1 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 5.380e-34 Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 3 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 452 +S TDEER L+ VG +HLGEFVN F HGSLVM+ L ++ +V+FGTVNG+IG++ SL Y L +Q L KVIK VG + H WRSF+ E+KT A F+DGDLIESFLD+SR +M E+ + + ++L K VEELTR+H Sbjct: 980 DSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140 The following BLAST results are available for this feature:
BLAST of BQ624076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ624076 ID=BQ624076; Name=BQ624076; organism=Citrus sinensis; type=EST; length=481bpback to top |