BQ624078

Overview
NameBQ624078
Unique NameBQ624078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13 contig Csv1_Contig13:331..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ624078 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 9.204e-86
Identity = 158/166 (95.18%), Postives = 162/166 (97.59%), Query Frame = 1
Query:    1 LNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLHPES 498
            LNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGR+ASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQ+CDAVQARAEQDK HGVILLPEGLIESIPEVYALLKEIH LLRQGV  +NISSQLSPWASALFEFLPPFIKKQLLL+PES
Sbjct:  219 LNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQVCDAVQARAEQDKYHGVILLPEGLIESIPEVYALLKEIHGLLRQGVSPNNISSQLSPWASALFEFLPPFIKKQLLLYPES 384          
BLAST of BQ624078 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 5.584e-83
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 1
Query:    1 LNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLSPWASALFEFLPPFIKKQLLLHPES 498
            LNGDLKNQFVE NVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGR+ASHVAL+CTLQSHPNMVILGEEVAASKLT+FD+T+QICDAVQARAE DKNHGVILLPEGLIESIPEVY+LL+EIH LLRQGV  D ISSQLSPWASALFEFLP FI+KQLLLHPES
Sbjct:  219 LNGDLKNQFVEANVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALDCTLQSHPNMVILGEEVAASKLTIFDITQQICDAVQARAEHDKNHGVILLPEGLIESIPEVYSLLQEIHGLLRQGVSADKISSQLSPWASALFEFLPHFIRKQLLLHPES 384          
BLAST of BQ624078 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 4.476e-40
Identity = 86/165 (52.12%), Postives = 115/165 (69.70%), Query Frame = 1
Query:    1 LNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNI---SSQLSPWASALFEFLPPFIKKQLLL 486
            ++GDLK++ V T+ GFDT CK+ +++I NV  DA S  KYY+F+RLMGR ASH+ LEC LQ+HPN+ ++GEEV A KLTL ++T  I D V  RAE   N+GVIL+PEGLI+ IPEV  L+ E++ +L   V VD       +L+P    LFE LP  I++QLLL
Sbjct:  213 IDGDLKSKEVPTSFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNVTLIGEEVFAKKLTLKNVTDYIADVVCKRAESGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDV-VDEAGVWKKKLTPQCLELFELLPLAIQEQLLL 376          
BLAST of BQ624078 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.701e-39
Identity = 86/165 (52.12%), Postives = 115/165 (69.70%), Query Frame = 1
Query:    1 LNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDN---ISSQLSPWASALFEFLPPFIKKQLLL 486
            ++GDLK + V T+ GFDT CK+ S++I NV  DA S  KYY+F+RLMGR ASH+ LEC LQ+HPN+ I+GEEVAA KL L D+T  I D +  RA+   N+GVIL+PEGLI+ IPEV  L+ E++ +L   V VD       +L+  +  LFEFLP  I++QL+L
Sbjct:  213 IDGDLKCKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKLALKDVTDYIVDVICKRADLGYNYGVILIPEGLIDFIPEVQNLIAELNEILAHDV-VDEGGLWKKKLTSQSLQLFEFLPVAIQEQLML 376          
The following BLAST results are available for this feature:
BLAST of BQ624078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PFPA_RICCO9.204e-8695.18Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_SOLTU5.584e-8390.96Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_SOLTU4.476e-4052.12Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_RICCO1.701e-3952.12Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_01169 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01169 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624078 ID=BQ624078; Name=BQ624078; organism=Citrus sinensis; type=EST; length=512bp
TTGAATGGAGATCTCAAGAATCAATTTGTGGAAACCAATGTTGGTTTTGA
TACAATATGCAAGGTCAATTCACAACTGATCAGTAATGTGTGCACTGATG
CTCTCTCTGCAGAGAAGTATTATTATTTTATTCGTCTGATGGGTAGGAGG
GCATCACATGTTGCTTTGGAATGCACCCTTCAGTCTCATCCGAATATGGT
AATTCTAGGTGAGGAAGTGGCTGCTTCAAAGCTTACTCTGTTTGATCTAA
CGAAACAAATTTGTGATGCTGTTCAAGCCAGAGCAGAACAAGACAAGAAC
CATGGGGTCATCCTGCTGCCAGAAGGGCTCATAGAAAGCATTCCTGAAGT
ATATGCTCTATTGAAGGAAATTCACAGTTTGCTGAGGCAAGGAGTTCCTG
TTGATAACATTTCTTCTCAACTTTCACCCTGGGCGTCTGCTTTGTTTGAA
TTTTTACCACCCTTCATCAAGAAACAGCTTCTTCTTCACCCCGAGTCCAG
ATGATTCTGCAC
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