BQ624103

Overview
NameBQ624103
Unique NameBQ624103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8418 contig Csv1_Contig8418:520..1035. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ624103 vs. ExPASy Swiss-Prot
Match: ETOL1_ARATH (ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL1 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 3.629e-69
Identity = 129/164 (78.66%), Postives = 139/164 (84.76%), Query Frame = 2
Query:    2 YQMLESDAPKGVLYFRQSXXXXXXNCPEAAMRSLQLARQHAASDHERLVYEGWILYDTSHCEEGLRKAEESIQMKRSFEAFFLKAYALAXXXXXXXXXXXXXXLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLK 493
            YQMLESDA KGVLYFRQS      NCPEAAMRSLQLAR+HA+SDHERLVYEGWILYDT HCEEGL+KA+ESI +KRSFEA+FL+AYALA              LLEDALKCPSDRLRKGQALNNLGSVYVDC +LDLAADCY NALK+RHTRAHQGLARVHFL+
Sbjct:  593 YQMLESDACKGVLYFRQSLLLLRLNCPEAAMRSLQLAREHASSDHERLVYEGWILYDTGHCEEGLQKAKESIGIKRSFEAYFLQAYALAESSLDPSSSSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDCEKLDLAADCYINALKVRHTRAHQGLARVHFLR 756          
BLAST of BQ624103 vs. ExPASy Swiss-Prot
Match: ETO1_ARATH (Ethylene-overproduction protein 1 OS=Arabidopsis thaliana GN=ETO1 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.211e-56
Identity = 111/164 (67.68%), Postives = 126/164 (76.83%), Query Frame = 2
Query:    2 YQMLESDAPKGVLYFRQSXXXXXXNCPEAAMRSLQLARQHAASDHERLVYEGWILYDTSHCEEGLRKAEESIQMKRSFEAFFLKAYALAXXXXXXXXXXXXXXLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLK 493
            + ML +D  K +L FRQS      NC +AAMRSL+LAR H+ S+HERLVYEGWILYDT H EE L KAEESI ++RSFEAFFLKAYALA              LL++ALKCPSD LRKGQALNNLGSVYVDC +LDLAADCY+NAL I+HTRAHQGLARV+ LK
Sbjct:  654 HHMLANDPGKSLLRFRQSLLLLRLNCQKAAMRSLRLARNHSKSEHERLVYEGWILYDTGHREEALAKAEESISIQRSFEAFFLKAYALADSTLDPDSSNYVIQLLQEALKCPSDGLRKGQALNNLGSVYVDCEKLDLAADCYTNALTIKHTRAHQGLARVYHLK 817          
BLAST of BQ624103 vs. ExPASy Swiss-Prot
Match: ETOL2_ARATH (ETO1-like protein 2 OS=Arabidopsis thaliana GN=EOL2 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 3.305e-46
Identity = 95/164 (57.93%), Postives = 115/164 (70.12%), Query Frame = 2
Query:    2 YQMLESDAPKGVLYFRQSXXXXXXNCPEAAMRSLQLARQHAASDHERLVYEGWILYDTSHCEEGLRKAEESIQMKRSFEAFFLKAYALAXXXXXXXXXXXXXXLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLK 493
            +QML++D  K  L FRQS      NC  AAMR L++A   A S+ ERLVYEGW+LYD  + EE L KAEE+I ++RSFEAFFLKAYALA              +LE+ALKCPSD LRKGQALNNLGS+Y++ G LD A   Y NA++I+H RA QGLARV+FLK
Sbjct:  620 HQMLQNDPSKNFLRFRQSLLLLRLNCQGAAMRCLRMAWNLATSEAERLVYEGWLLYDMGYVEETLTKAEEAISIQRSFEAFFLKAYALADKNLDADEISCVVQVLEEALKCPSDGLRKGQALNNLGSIYINLGMLDQAETAYKNAIEIKHIRARQGLARVYFLK 783          
The following BLAST results are available for this feature:
BLAST of BQ624103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ETOL1_ARATH3.629e-6978.66ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL... [more]
ETO1_ARATH1.211e-5667.68Ethylene-overproduction protein 1 OS=Arabidopsis t... [more]
ETOL2_ARATH3.305e-4657.93ETO1-like protein 2 OS=Arabidopsis thaliana GN=EOL... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_01194 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01194 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624103 ID=BQ624103; Name=BQ624103; organism=Citrus sinensis; type=EST; length=517bp
CTACCAGATGCTTGAATCTGATGCTCCAAAAGGAGTATTATACTTCAGGC
AGTCTTTACTTCTCCTTAGGTTAAATTGTCCTGAGGCAGCCATGCGAAGT
TTACAGTTAGCTCGCCAACATGCAGCCAGTGATCACGAACGCCTGGTGTA
TGAGGGATGGATTTTATATGATACGAGTCATTGTGAGGAAGGGCTTAGAA
AAGCAGAAGAGTCTATCCAAATGAAGAGATCGTTTGAAGCCTTCTTCCTT
AAGGCCTATGCATTGGCCGACTCTAGCCAGGATTCATCTTGTTCTTCAAC
TGTTGTTTCACTGCTTGAAGATGCCTTGAAGTGCCCCTCAGACAGGCTGC
GCAAAGGTCAGGCACTGAACAATCTAGGAAGTGTTTATGTTGACTGTGGG
CAGTTGGACTTGGCTGCTGATTGCTACAGCAATGCACTAAAGATCCGGCA
TACCCGCGCTCACCAGGGTCTTGCTCGGGTTCATTTTCTGAAAAAATAAT
AAAACAACGGCATACGA
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