BQ624129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ624129 vs. ExPASy Swiss-Prot
Match: PRP6_HUMAN (Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.035e-27 Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 59 AVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFELQHGSEDNQKDVLKRCVAAEPKHGEKWQAVSKAVENSHQPTEAILKKV 322 AVAKLFW RK+ KAR W +R V + D+GD WA +YKFELQHG+E+ Q++V KRC +AEP+HGE W AVSK + N + IL+ V Sbjct: 846 AVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCESAEPRHGELWCAVSKDIANWQKKIGDILRLV 933 HSP 2 Score: 33.4982 bits (75), Expect = 6.035e-27 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 1 RSKSADAYKNCDHDPHVI 54 R+KS DA K C+HDPHV+ Sbjct: 827 RTKSVDALKKCEHDPHVL 844
BLAST of BQ624129 vs. ExPASy Swiss-Prot
Match: PRP6_MOUSE (Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.820e-26 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 59 AVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFELQHGSEDNQKDVLKRCVAAEPKHGEKWQAVSKAVENSHQPTEAIL 313 AVAKLFW +RK+ KAR W +R V + D+GD WA +YKFELQHG+E+ Q++V KRC AEP+HGE W AVSK + N + IL Sbjct: 846 AVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCAVSKDITNWQRKIGEIL 930 HSP 2 Score: 32.3426 bits (72), Expect = 3.820e-26 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 1 RSKSADAYKNCDHDPHVI 54 ++KS DA K C+HDPHV+ Sbjct: 827 KTKSVDALKKCEHDPHVL 844
BLAST of BQ624129 vs. ExPASy Swiss-Prot
Match: PRP1_SCHPO (Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe GN=prp1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.494e-15 Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 62 VAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFELQHGSEDNQKDVLKRCVAAEPKHGEKWQAVSKAVENSHQPTEAILKKVVLAL 334 +A++ W ++K DKAR+W +AV D GD W +YK+ L+ G+ED QK+VL A+P HG W +++K ++NS + + +L + L Sbjct: 816 IARMLWLEKKADKARSWFLKAVKADQDNGDVWCWFYKYSLEAGNEDQQKEVLTSFETADPHHGYFWPSITKDIKNSRKTPQELLHLAINVL 906 The following BLAST results are available for this feature:
BLAST of BQ624129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ624129 ID=BQ624129; Name=BQ624129; organism=Citrus sinensis; type=EST; length=624bpback to top |