BQ624235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH_BRARA (Photosystem I reaction center subunit VI, chloroplastic OS=Brassica rapa GN=PSAH PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.887e-41 Identity = 79/94 (84.04%), Postives = 85/94 (90.43%), Query Frame = 3 Query: 9 KALEAASLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +SL G KL +KP+RQ+ +PKS +AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 17 KGLGGSSLTGAKLFIKPSRQSFKPKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110 HSP 2 Score: 24.2534 bits (51), Expect = 4.887e-41 Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 292 GGSTLAYFSATASGDI 339 GGS L Y SA+++GD+ Sbjct: 111 GGSLLTYVSASSTGDV 126
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH2_ARATH (Photosystem I reaction center subunit VI-2, chloroplastic OS=Arabidopsis thaliana GN=PSAH2 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.061e-40 Identity = 78/94 (82.98%), Postives = 85/94 (90.43%), Query Frame = 3 Query: 9 KALEAASLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +SLAG KL +KP+RQ+ + KS +AGAVVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 17 KGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110 HSP 2 Score: 23.8682 bits (50), Expect = 4.061e-40 Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 292 GGSTLAYFSATASGDI 339 GGS L Y SA ++GD+ Sbjct: 111 GGSLLTYVSANSTGDV 126
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH1_ARATH (Photosystem I reaction center subunit VI-1, chloroplastic OS=Arabidopsis thaliana GN=PSAH1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.983e-40 Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 3 Query: 9 KALEAASLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +SLAG KL++KP+R + +PKS +A VVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 17 KGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILG 110 HSP 2 Score: 24.2534 bits (51), Expect = 8.983e-40 Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 292 GGSTLAYFSATASGDI 339 GGS L Y SAT++G++ Sbjct: 111 GGSLLTYVSATSTGEV 126
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH_SPIOL (Photosystem I reaction center subunit VI, chloroplastic OS=Spinacia oleracea GN=PSAH PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.699e-38 Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 3 Query: 9 KALEAASLAGTKLTVKPTRQNLRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +S+AGTKL +KP RQ+ + + ++GA+VAKYGDKSVYFDLED+ NTTGQWD+YGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG Sbjct: 16 KGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDLEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 109
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH_MAIZE (Photosystem I reaction center subunit VI, chloroplastic OS=Zea mays GN=PSAH PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.820e-34 Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 3 Query: 9 KALEAASLAGTKLTV-KPTRQNLRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +S++G KL V +P+ +++R +A AVVAKYGDKSVYFDL+D+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFL+LG Sbjct: 15 KGLAGSSISGRKLAVARPSARSIRRP--RAAAVVAKYGDKSVYFDLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLG 107 HSP 2 Score: 24.6386 bits (52), Expect = 3.820e-34 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 292 GGSTLAYFSATASGDI 339 GGS LAY SA+AS D+ Sbjct: 108 GGSLLAYVSASASPDL 123
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSJ (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. japonica GN=PSAH PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.164e-33 Identity = 69/95 (72.63%), Postives = 78/95 (82.11%), Query Frame = 3 Query: 9 KALEAASLAGTKLTVKPTRQNL-RPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +S++G KL V+P+ + L R AVVAKYG+KSVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKRGLLLKFL+LG Sbjct: 13 KGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLG 107 HSP 2 Score: 23.483 bits (49), Expect = 3.164e-33 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 292 GGSTLAYFSATASGDI 339 GGS +AY SA+AS D+ Sbjct: 108 GGSLVAYVSASASPDL 123
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSI (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. indica GN=PSAH PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.164e-33 Identity = 69/95 (72.63%), Postives = 78/95 (82.11%), Query Frame = 3 Query: 9 KALEAASLAGTKLTVKPTRQNL-RPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +S++G KL V+P+ + L R AVVAKYG+KSVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKRGLLLKFL+LG Sbjct: 13 KGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLG 107 HSP 2 Score: 23.483 bits (49), Expect = 3.164e-33 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 292 GGSTLAYFSATASGDI 339 GGS +AY SA+AS D+ Sbjct: 108 GGSLVAYVSASASPDL 123
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH_HORVU (Photosystem I reaction center subunit VI, chloroplastic OS=Hordeum vulgare GN=PSAH PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.782e-32 Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 3 Query: 9 KALEAASLAGTKLTVKPTRQNLRPKSFKA--GAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILG 290 K L +S++G KL V+P+ + + +A AVVAKYG+KSVYFDL+D+ NTTGQWDLYGSDAPSPYN LQSKFF TFAAPFTKRGLLLKFL++G Sbjct: 13 KGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLDDIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIG 108 HSP 2 Score: 23.483 bits (49), Expect = 5.782e-32 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 292 GGSTLAYFSATASGDI 339 GGS +AY SA+AS D+ Sbjct: 109 GGSLVAYVSASASPDL 124
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Match: PSAH_PEA (Photosystem I reaction center subunit VI (Fragment) OS=Pisum sativum GN=PSAH PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.746e-14 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 111 KYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQ 218 KYGDKSVYFDLED+GNTTGQWDLYGSDAPSPY+ LQ Sbjct: 1 KYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYSXLQ 36 The following BLAST results are available for this feature:
BLAST of BQ624235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ624235 ID=BQ624235; Name=BQ624235; organism=Citrus sinensis; type=EST; length=558bpback to top |