BQ624264

Overview
NameBQ624264
Unique NameBQ624264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.502e-36
Identity = 71/91 (78.02%), Postives = 82/91 (90.11%), Query Frame = 3
Query:  117 EKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAKCMCPNKQK 389
            +K+L  Q SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQ+L PNMDKQTNT++MLDLAV++IKDLQ+Q K+L DN+A C C NK+K
Sbjct:  266 DKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKEK 356          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.230e-35
Identity = 63/78 (80.77%), Postives = 73/78 (93.59%), Query Frame = 3
Query:  141 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAKCMC 374
            S+PCKIRAKRGCATHPRSIAERVRRT+ISERMRKLQDL PNMD QTNTA+MLDLAV++IKDLQ+QVK L +++A+C C
Sbjct:  299 SIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376          

HSP 2 Score: 34.2686 bits (77), Expect = 1.230e-35
Identity = 14/34 (41.18%), Postives = 25/34 (73.53%), Query Frame = 2
Query:    5 SFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEM 106
            S GLD Y+T++ +S ++   L HH+SLPK+ +++
Sbjct:  259 SGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSDI 292          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.759e-29
Identity = 57/86 (66.28%), Postives = 75/86 (87.21%), Query Frame = 3
Query:  132 FQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAKCMCPNKQK 389
            F+ SVPC++RAKRGCATHPRSIAERVRRTRIS+R+R+LQ+L PNMDKQTNTA+ML+ AVE++K LQ Q++ LT+ + +C C  K++
Sbjct:  173 FEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQKRCKCKPKEE 258          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.140e-26
Identity = 55/85 (64.71%), Postives = 73/85 (85.88%), Query Frame = 3
Query:  135 QGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAKCMCPNKQK 389
            + SV  ++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+L PNMDKQTNTA+ML+ AVE++K LQ+Q++ LT+ + +C C  K++
Sbjct:  177 EDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTCIPKEE 261          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.356e-26
Identity = 56/85 (65.88%), Postives = 69/85 (81.18%), Query Frame = 3
Query:  135 QGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAKCMCPNKQK 389
            + SVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQDL PNMDKQT+ ++MLDLAV+HIK LQ Q++ L  ++  C C   +K
Sbjct:  276 EDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEK 360          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH129_ARATH (Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.751e-22
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 3
Query:  135 QGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKL 344
            + SVPC+ RAKRG ATHPRSIAER RRTRIS +++KLQ+L PNMDKQT+ A+MLDLAVEHIK LQ QV++
Sbjct:  226 EDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVEV 295          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.869e-13
Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 3
Query:  153 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 350
            K+RA+RG AT P SIAER+RR RI+ERM+ LQ+L PN +K T+ A MLD  ++++K LQ QVK+L+
Sbjct:  129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLS 193          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.869e-13
Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = 3
Query:  153 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 350
            KIRA+RG AT P SIAER+RR RI+ERM+ LQ+L PN +K T+ A MLD  ++++K LQ QVK+L+
Sbjct:  137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLS 201          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12
Identity = 37/66 (56.06%), Postives = 52/66 (78.79%), Query Frame = 3
Query:  153 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 350
            ++RA+RG AT P SIAER+RR RI+ERM+ LQ+L PN +K T+ A MLD  +E+++ LQ QVK+L+
Sbjct:   98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQVKVLS 162          
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Match: BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.976e-12
Identity = 37/74 (50.00%), Postives = 56/74 (75.68%), Query Frame = 3
Query:  129 HFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 350
            H Q ++  ++RA+RG AT P SIAER+RR RI+ER+R LQ+L P ++K T+ A M+D  V+++K L+ QVK+L+
Sbjct:  135 HQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVKVLS 207          
The following BLAST results are available for this feature:
BLAST of BQ624264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
BH130_ARATH1.502e-3678.02Transcription factor bHLH130 OS=Arabidopsis thalia... [more]
BH122_ARATH1.230e-3580.77Transcription factor bHLH122 OS=Arabidopsis thalia... [more]
BH080_ARATH6.759e-2966.28Transcription factor bHLH80 OS=Arabidopsis thalian... [more]
BH081_ARATH3.140e-2664.71Transcription factor bHLH81 OS=Arabidopsis thalian... [more]
BH128_ARATH5.356e-2665.88Transcription factor bHLH128 OS=Arabidopsis thalia... [more]
BH129_ARATH2.751e-2272.86Transcription factor bHLH129 OS=Arabidopsis thalia... [more]
BH069_ARATH8.869e-1357.58Transcription factor bHLH69 OS=Arabidopsis thalian... [more]
BH066_ARATH8.869e-1359.09Transcription factor bHLH66 OS=Arabidopsis thalian... [more]
BH082_ARATH1.158e-1256.06Transcription factor bHLH82 OS=Arabidopsis thalian... [more]
BH007_ARATH1.976e-1250.00Transcription factor bHLH7 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01355 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01355 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624264 ID=BQ624264; Name=BQ624264; organism=Citrus sinensis; type=EST; length=533bp
CATGTCTTTTGGTCTAGACGCATATGAAACTCAGAATGGAAATTCTGGAA
ACCAATCTACTCGCTTGGTCCACCATTTGAGCTTACCAAAAACATCTGCT
GAAATGGCTGCTGTGGGAGAAGTTTTTGCATTTTCAAGGTTCTGTTCCTT
GCAAGATTCGAGCCAAGAGAGGTTGTGCCACTCATCCAAGAAGCATTGCC
GAGAGGGTTAGAAGAACTCGGATAAGTGAACGAATGAGGAAATTGCAAGA
CCTTTTCCCAAACATGGACAAGCAAACAAACACAGCTGAAATGTTAGATC
TGGCAGTTGAACACATTAAAGATCTTCAGAAACAAGTCAAGTTACTCACG
GACAATAAGGCAAAATGCATGTGCCCAAACAAACAAAAGCTATGTTGAAT
TACAAAAACTTCCGGTAGACTTGTATCTGTACAGATAGCTTAAGGAAGCT
GCTACTTGTGAGATGAAAAAGAAAGATGACTCCTCATTTCCACTGCCCTT
AAAAAATAATAGGATAGCGAGTGAGATTTAACG
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