BQ624267

Overview
NameBQ624267
Unique NameBQ624267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_RAT (Eukaryotic translation initiation factor 3 subunit G OS=Rattus norvegicus GN=Eif3g PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 6.817e-35
Identity = 77/164 (46.95%), Postives = 101/164 (61.59%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +           +K               G YVPP +R GA R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  151 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQNKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 312          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_MOUSE (Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus GN=Eif3g PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 6.817e-35
Identity = 77/164 (46.95%), Postives = 101/164 (61.59%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +           +K               G YVPP +R GA R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  151 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQSKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 312          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_HUMAN (Eukaryotic translation initiation factor 3 subunit G OS=Homo sapiens GN=EIF3G PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 6.817e-35
Identity = 77/164 (46.95%), Postives = 101/164 (61.59%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +           +K               G YVPP +R GA R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  151 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 312          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_BOVIN (Eukaryotic translation initiation factor 3 subunit G OS=Bos taurus GN=EIF3G PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 6.817e-35
Identity = 77/164 (46.95%), Postives = 101/164 (61.59%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI-----------DKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +           +K               G YVPP +R GA R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  151 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 312          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_XENTR (Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=eif3g PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.163e-34
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI---------DK---PXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +         DK   P              G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  140 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 302          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3GB_XENLA (Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3g-B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.163e-34
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI---------DK---PXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +         DK   P              G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  138 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTADKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 300          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3GA_XENLA (Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3g-A PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.163e-34
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI---------DK---PXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +         DK   P              G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  138 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 300          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_DANRE (Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.590e-34
Identity = 77/163 (47.24%), Postives = 101/163 (61.96%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI---------DKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT+RCP+KD   P +  +         +K              K G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  +EDA RAI  ++G+GYD+LIL V
Sbjct:  125 GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKAAEPEPAQPVQNKTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNV 285          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_NEMVE (Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis GN=v1g171563 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.571e-31
Identity = 72/161 (44.72%), Postives = 98/161 (60.87%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXX--------TKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  ++ CR C  KGDHWT++CP+KD        + +                     T G YV PG+R GA R G  M    +R++  ++RVTNLSE+TRE DL ELFRP G +SR+++A D+ T  S+GF F+NFV++EDA RAI  L+G+GYD+LIL V
Sbjct:  127 GQKIVQCRIC--KGDHWTTKCPYKDQLEVIHQQLKEDDGSGQPGTPPSEPANPAAASTSGKYVAPGLRDGANRRGETMPSRSQRDETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSGFGYDHLILNV 285          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_SCHPO (Eukaryotic translation initiation factor 3 subunit G OS=Schizosaccharomyces pombe GN=tif35 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.054e-27
Identity = 63/158 (39.87%), Postives = 101/158 (63.92%), Query Frame = 3
Query:   27 AQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILR 491
            A++   G+ ++ CR C  KG+H+T++CP+K +  P +                   KG Y+ P +RAG+ R   D    R R+D  ++RVTNLS+DTRE +L +LFR FG + RVY+A D++TG ++GF FV++ +++ A +A ++L+GYG++NLILR
Sbjct:  119 AKVKAKGSSVVRCRAC--KGNHFTAQCPYKSIIGPVDEPPLDASPVSSRASGALGEKGRYIAPHLRAGSGRESGDSMFKRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDGYGWNNLILR 274          
The following BLAST results are available for this feature:
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EIF3G_RAT6.817e-3546.95Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_MOUSE6.817e-3546.95Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_HUMAN6.817e-3546.95Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_BOVIN6.817e-3546.95Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_XENTR1.163e-3447.27Eukaryotic translation initiation factor 3 subunit... [more]
EI3GB_XENLA1.163e-3447.27Eukaryotic translation initiation factor 3 subunit... [more]
EI3GA_XENLA1.163e-3447.27Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_DANRE2.590e-3447.24Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_NEMVE1.571e-3144.72Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_SCHPO1.054e-2739.87Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624267 ID=BQ624267; Name=BQ624267; organism=Citrus sinensis; type=EST; length=495bp
AGACAAAGGCTGCAGGAGATTCCTTGGCGCAACTTGGGAAAGGTGGTGCT
GTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCACTGGACGTC
AAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACATTCATTGATA
AACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCGACCAAGGGA
ACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAACTGGAACCGA
TATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCAACCTATCGG
AGGACACTCGGGAACCTGACTTGCTTGAGCTCTTCCGACCTTTTGGTGCT
GTTAGCCGAGTTTATGTTGCTGTTGATCAGAAGACTGGCATAAGCCGGGG
TTTTGGTTTTGTGAACTTTGTGAACAAGGAAGATGCTCAGAGAGCTATCA
ACAAACTGAATGGCTATGGTTATGACAATCTCATCCTCAGAGTTG
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