BQ624270

Overview
NameBQ624270
Unique NameBQ624270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.470e-36
Identity = 80/193 (41.45%), Postives = 113/193 (58.55%), Query Frame = 3
Query:    3 LFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDE-RALLEDRFIREVNMMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDV 575
            LFIG+K   GAH ++Y G Y  R VA+K++   +  +E RA LE +F  EV ++SR+ H N+V+F+ ACK P +  I+TE +   +LR YL    P  L +   L  ALDI+R M+ LH+ G+IHRDLK +NLLL  D+  +K+ADFG +               YRWMAPE+         ++K Y  +VDV
Sbjct:   86 LFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTHKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLN-DEMRVKVADFGTSCLETQCREAKGNMGTYRWMAPEMI--------KEKPYTRKVDV 269          

HSP 2 Score: 31.187 bits (69), Expect = 2.470e-36
Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPFQ 628
            YSFGI LWEL T  LPFQ
Sbjct:  270 YSFGIVLWELTTALLPFQ 287          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.179e-23
Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 3
Query:    3 LFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            L I SK+GEG  G VY+G +    VAIK +      + + L E  F +E+ ++SR++H N+V  + AC   P +  +TE LPG SL   L S +  K+++ +    A+ IA+ M+ LH +G+IHRD+K  NLLL  +  ++K+ DFGL++                WM+PEL        GE   Y  +VDV A
Sbjct:  662 LKISSKLGEGTFGVVYKGLWRGSSVAIKQIKINEDVNNQVLEE--FRKELTILSRLRHPNIVLLMAACTAPPNLCFITEYLPGGSLYDALHS-KKIKMNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLL-DEHMNVKICDFGLSKLKSKSTEMTKSIGSPIWMSPELL------MGE--DYTEKVDVYA 843          

HSP 2 Score: 26.9498 bits (58), Expect = 2.179e-23
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI LWEL T  LP+
Sbjct:  842 YAFGIILWELGTGELPY 858          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.478e-21
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 3
Query:    9 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            +G +IG G+ G VY+G++ GD  VA+K+LN  + + ++      F  EV ++ + +H N++ F+G    P + IVT+   G SL  +L  +   K ++   ++ A   A+ MD LHA  IIHRDLK +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K  Y+ Q DV A
Sbjct:  499 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDKNPYSFQSDVYA 681          

HSP 2 Score: 26.1794 bits (56), Expect = 5.478e-21
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI L+EL+T  LP+
Sbjct:  680 YAFGIVLYELMTGQLPY 696          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.478e-21
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 3
Query:    9 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            +G +IG G+ G VY+G++ GD  VA+K+LN  + + ++      F  EV ++ + +H N++ F+G    P + IVT+   G SL  +L  +   K ++   ++ A   A+ MD LHA  IIHRDLK +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K  Y+ Q DV A
Sbjct:  499 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDKNPYSFQSDVYA 681          

HSP 2 Score: 26.1794 bits (56), Expect = 5.478e-21
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI L+EL+T  LP+
Sbjct:  680 YAFGIVLYELMTGQLPY 696          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 5.478e-21
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 3
Query:    9 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            +G +IG G+ G VY+G++ GD  VA+K+LN  + + ++      F  EV ++ + +H N++ F+G    P + IVT+   G SL  +L  +   K ++   ++ A   A+ MD LHA  IIHRDLK +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K  Y+ Q DV A
Sbjct:  496 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDKNPYSFQSDVYA 678          

HSP 2 Score: 26.1794 bits (56), Expect = 5.478e-21
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI L+EL+T  LP+
Sbjct:  677 YAFGIVLYELMTGQLPY 693          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 93.9745 bits (232), Expect = 5.483e-21
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 3
Query:    9 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            +G +IG G+ G VY+G++ GD  VA+K+LN  + + ++      F  EV ++ + +H N++ F+G    P + IVT+   G SL  +L  +   K ++   ++ A   A+ MD LHA  IIHRDLK +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K  Y+ Q DV A
Sbjct:  459 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDKNPYSFQSDVYA 641          

HSP 2 Score: 26.1794 bits (56), Expect = 5.483e-21
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI L+EL+T  LP+
Sbjct:  640 YAFGIVLYELMTGQLPY 656          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.536e-21
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 3
Query:    9 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            +G +IG G+ G VY+G++ GD  VA+K+LN  + + ++      F  EV ++ + +H N++ F+G    P + IVT+   G SL  +L  +   K ++   ++ A   A+ MD LHA  IIHRDLK +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K  Y+ Q DV A
Sbjct:   85 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDKNPYSFQSDVYA 267          

HSP 2 Score: 26.1794 bits (56), Expect = 5.536e-21
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI L+EL+T  LP+
Sbjct:  266 YAFGIVLYELMTGQLPY 282          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.557e-21
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 3
Query:    9 IGSKIGEGAHGKVYEGRY-GDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            +G +IG G+ G VY+G++ GD  VA+K+LN  + + ++      F  EV ++ + +H N++ F+G    P + IVT+   G SL  +L  +   K ++   ++ A   A+ MD LHA  IIHRDLK +N+ L  D  ++K+ DFGLA                    WMAPE+     +R  +K  Y+ Q DV A
Sbjct:   69 VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV-----IRMQDKNPYSFQSDVYA 251          

HSP 2 Score: 26.1794 bits (56), Expect = 5.557e-21
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI L+EL+T  LP+
Sbjct:  250 YAFGIVLYELMTGQLPY 266          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: KRAF1_DROME (Raf homolog serine/threonine-protein kinase phl OS=Drosophila melanogaster GN=phl PE=1 SV=5)

HSP 1 Score: 95.9005 bits (237), Expect = 9.273e-21
Identity = 68/196 (34.69%), Postives = 97/196 (49.49%), Query Frame = 3
Query:    3 LFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNQVDVTA 581
            + IG +IG G+ G VY   +    VA+K LN  + S  +      F  EV M+ + +H N++ F+G    P + IVT+   G SL K+ V +   K  L+  ++    +A+ MD LHA  IIHRDLK +N+ L  D  S+K+ DFGLA                    WMAPE+     +R  E   Y+ Q DV A
Sbjct:  472 ILIGPRIGSGSFGTVYRAHWHGP-VAVKTLNVKTPSPAQL---QAFKNEVAMLKKTRHCNILLFMGCVSKPSLAIVTQWCEGSSLYKH-VHVSETKFKLNTLIDIGRQVAQGMDYLHAKNIIHRDLKSNNIFLHED-LSVKIGDFGLATAKTRWSGEKQANQPTGSILWMAPEV-----IRMQELNPYSFQSDVYA 656          

HSP 2 Score: 23.483 bits (49), Expect = 9.273e-21
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            Y+FGI ++ELL   LP+
Sbjct:  655 YAFGIVMYELLAECLPY 671          
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Match: TNI3K_RAT (Serine/threonine-protein kinase TNNI3K OS=Rattus norvegicus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 4.484e-20
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   21 IGEGAHGKVYEGRYGDRIVAIKVLNRGSTSDERALLEDRFIREVNMMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHA--NGIIHRDLKPDNLLLTPDQKSLKLADFGLAR--XXXXXXXXXXXXXXYRWMAPELYSTVT 530
            IG G+ GKVY+GR  ++IVAIK     +   +  +  D F REV+++ ++ H  +V+F+GAC D      IVT+ + G SL   L+  +   LDL   L  A+D+A+ M+ LH+    IIHRDL   N+LL  D  ++ +ADFG +R                 RWMAPE+++  T
Sbjct:  469 IGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDV--DMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFS-LLHEQKRILDLQSKLIIAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDGHAV-VADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCT 640          

HSP 2 Score: 26.1794 bits (56), Expect = 4.484e-20
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  575 YSFGIGLWELLTNPLPF 625
            +S+ + LWELLT  +PF
Sbjct:  649 FSYSLCLWELLTGEIPF 665          
The following BLAST results are available for this feature:
BLAST of BQ624270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH2.470e-3641.45Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
Y9955_DICDI2.179e-2336.08Probable serine/threonine-protein kinase DDB_G0267... [more]
BRAF1_COTJA5.478e-2133.85B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK5.478e-2133.85B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_MOUSE5.478e-2133.85B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN5.483e-2133.85B-Raf proto-oncogene serine/threonine-protein kina... [more]
RMIL_AVEVR5.536e-2133.85Serine/threonine-protein kinase-transforming prote... [more]
RMIL_AVII15.557e-2133.85Serine/threonine-protein kinase-transforming prote... [more]
KRAF1_DROME9.273e-2134.69Raf homolog serine/threonine-protein kinase phl OS... [more]
TNI3K_RAT4.484e-2036.93Serine/threonine-protein kinase TNNI3K OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01361 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01361 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624270 ID=BQ624270; Name=BQ624270; organism=Citrus sinensis; type=EST; length=629bp
TATTGTTTATTGGCTCTAAAATTGGTGAAGGAGCTCATGGGAAAGTTTAT
GAAGGAAGGTATGGCGATCGGATTGTTGCTATCAAAGTTCTCAATCGTGG
GAGCACTTCAGATGAAAGAGCTTTGCTTGAGGATCGTTTTATTCGTGAAG
TGAATATGATGTCTAGAGTAAAACATGACAATCTTGTCAAGTTTCTTGGA
GCTTGTAAGGATCCACTAATGGTGATAGTGACGGAGCTATTACCAGGGAT
GTCGCTTCGAAAGTATTTAGTTAGCCTTCGTCCAAACAAATTAGATCTTC
ATGTGGCTTTAAATTTTGCTCTTGACATAGCTCGAGCCATGGATTGTCTG
CATGCCAATGGGATTATTCATAGAGATTTAAAACCTGACAATTTGTTGCT
TACACCAGATCAGAAGTCTTTGAAGCTTGCAGATTTTGGTCTTGCGAGAG
AAGAAACTGTGACCGAGATGATGACTGCAGAAACGGGTACTTATCGCTGG
ATGGCTCCTGAGTTGTACAGCACAGTGACATTGCGTCAGGGAGAGAAGAA
GCATTACAATAACCAGGTTGATGTTACAGCTTCGGAATTGGCCTATGGGA
ACTGTTAACCAACCCTTTGCCTTTCCAAA
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