BQ624277

Overview
NameBQ624277
Unique NameBQ624277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ624277 vs. ExPASy Swiss-Prot
Match: Y4105_ARATH (Uncharacterized protein At4g01050 OS=Arabidopsis thaliana GN=At4g01050 PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 1.113e-61
Identity = 101/153 (66.01%), Postives = 116/153 (75.82%), Query Frame = 3 
Query:   66 GTLNWLRELVTINGFKNAYTIKDGAEGPRGWMNSGLPWIPPKKALGLDLSNLTETISGAIGEGSEGFSVTXXXXXXXXXXXXXFSEIETILQILGSAALVQFASKKLLFAEDRKQTLQQVDEFLNTKVAPKELADDIKQIGKTLLPSPANGKA 524
            G    + ELV +NGFK+AY IKDGAEGPRGW+NS LPWI PKK L LDLS+LT++ISG  GE S+G SV              F+EIETILQ+LGSAALVQ A KKLLFAEDRKQTL+QVDEFLNTKVAPKEL D++K+IGK LLP   + KA
Sbjct:  211 GNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTLSLDLSSLTDSISGVFGESSDGVSVALGVAAAAGLSVFAFTEIETILQLLGSAALVQLAGKKLLFAEDRKQTLKQVDEFLNTKVAPKELVDELKEIGKALLPQSTSNKA 363

HSP 2 Score: 56.225 bits (134), Expect = 1.113e-61
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 2 
Query:    2 KLSLKFKEPENTTLFILDKFDGNSELVA 85
            KLSLKFK+PENTTL+ILDKFDGNSELVA
Sbjct:  190 KLSLKFKDPENTTLYILDKFDGNSELVA 217
The following BLAST results are available for this feature:
BLAST of BQ624277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4105_ARATH1.113e-6166.01Uncharacterized protein At4g01050 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_01368 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01368 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624277 ID=BQ624277; Name=BQ624277; organism=Citrus sinensis; type=EST; length=525bp
GAAGCTGTCTTTGAAGTTCAAGGAACCAGAAAATACTACATTGTTCATTC
TAGACAAATTTGATGGGAACTCTGAACTGGTTGCGTGAGTTGGTCACCAT
AAATGGATTCAAAAATGCATACACTATAAAAGATGGAGCAGAAGGACCTC
GTGGATGGATGAACAGTGGTCTTCCTTGGATACCGCCAAAGAAAGCATTG
GGTCTTGACCTGAGCAATTTGACAGAAACTATCAGTGGTGCAATTGGAGA
GGGCTCGGAGGGCTTTTCTGTTACCCTTGCAATTGCTGCAGCTGCAGGAT
TGGGTGTTTTGGCATTTTCAGAGATAGAAACGATATTGCAAATTCTAGGC
TCAGCTGCTCTTGTTCAATTTGCTAGCAAGAAGCTCCTGTTTGCAGAGGA
TCGGAAACAAACACTACAACAGGTTGATGAATTCCTGAACACCAAGGTCG
CCCCTAAAGAGCTTGCTGATGACATAAAGCAAATTGGAAAGACACTTCTA
CCATCACCGGCAAATGGCAAGGCTC
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