BQ624301

Overview
NameBQ624301
Unique NameBQ624301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length550
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.024e-91
Identity = 164/182 (90.11%), Postives = 177/182 (97.25%), Query Frame = 2
Query:    5 VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMGKFISDLF 550
            VGVVYCL SW+VGLPKRAP+DSKLLKLLIPVAVCHA+GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P+TLWLSLAPVVIGVSMASLTELSFNW GFISAMISN+SFTYRS+YSKKAMTDMDSTNIYAYISIIALFVC+PPAIIVEGPQL+KHG +DAI+KVG+ KFISDLF
Sbjct:  140 VGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAMTDMDSTNIYAYISIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLF 321          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.252e-89
Identity = 159/182 (87.36%), Postives = 177/182 (97.25%), Query Frame = 2
Query:    5 VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMGKFISDLF 550
            VGVVYCLVSW+VGLPKRAP++S +LK+LIPVAVCHA+GHVTSNVSFAAVAVSFTHTIKALEPFFNA+ASQF+LGQ +P+TLWLSLAPVV+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC+PPAIIVEGPQL+KHG +DAI+KVGM KFISDLF
Sbjct:  143 VGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLF 324          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 2.789e-89
Identity = 163/182 (89.56%), Postives = 172/182 (94.51%), Query Frame = 2
Query:    5 VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMGKFISDLF 550
            VGVVYCL  WAVGLPKRAP+DS LLKLLIPVA CHALGHVTSNVSFAAVAVSFTHTIK+LEPFFNAAASQFILGQ +P+TLWLSLAPVVIGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISII+L  CIPPAII+EGPQL+KHG SDAI+KVGM KFISDLF
Sbjct:  144 VGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLF 325          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.643e-89
Identity = 162/182 (89.01%), Postives = 172/182 (94.51%), Query Frame = 2
Query:    5 VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMGKFISDLF 550
            VGVVYCLVSW VGLPKRAPID  LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT+KALEPFFNAAASQFILGQ +P+TLWLSLAPVVIGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCIPPA+I+EGP L+K G +DAI+KVG+ KF+SDLF
Sbjct:  138 VGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLF 319          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 8.973e-88
Identity = 158/182 (86.81%), Postives = 170/182 (93.41%), Query Frame = 2
Query:    5 VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMGKFISDLF 550
            VGVVYCL SW VGLPKRAP+DS +LKLLIPV  CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P++LWLSLAPVVIGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  CIPPA++ EGPQL+KHG +DAI+KVGM KFISDLF
Sbjct:  143 VGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLF 324          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 1.692e-86
Identity = 155/182 (85.16%), Postives = 168/182 (92.31%), Query Frame = 2
Query:    5 VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMGKFISDLF 550
            VGVVYCLVSW VGLPKRAPIDS  LKLL PVA CHALGHVTSNVSFAAV VSFTHT+KALEPFFNAAASQFILGQQ+PL LWLSLAPVV+GVSMASLTELSFNW GF SAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  C+PPAI +EGPQL++HG +DAI+KVG+ KF++DLF
Sbjct:  150 VGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLF 331          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.210e-86
Identity = 153/183 (83.61%), Postives = 173/183 (94.54%), Query Frame = 2
Query:    2 LVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMGKFISDLF 550
            +VGVVYCL+SW+VGLPKRAPI+  LLKLL PVA+CH +GH+TSNVSFAAVAVSF HTIKALEPFF+AAA+QFILGQQ+P +LWLSLAPVVIGVSMASLTELSFNWTGFI+AMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL VCIPPA+I EGP+L++HG SDAI+KVG+ KF+SDLF
Sbjct:  145 VVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLF 327          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.241e-38
Identity = 80/174 (45.98%), Postives = 116/174 (66.67%), Query Frame = 2
Query:    8 GVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 523
            G +  L+SWAVG+ +    D    K L PVAV H +GHV + VS + VAVSFTH IK+ EP F+   S+FILG+  P +++LSL P++ G ++++LTEL+FN  GF+ AMISN++F +R+I+SKK M    +   N YA +S+++L +  P AI VEGPQ+   G   A++ VG
Sbjct:  136 GSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVG 309          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.416e-37
Identity = 78/174 (44.83%), Postives = 115/174 (66.09%), Query Frame = 2
Query:    8 GVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 523
            G +  LVSWA  +      D +  K L PVAV H +GHV + VS + VAVSFTH IK+ EP F+   S+F +G+  PL ++LSL P++ G ++A++TEL+FN TGF+ AMISN++F +R+I+SKK M    +   N YA +S+++L +  P +I VE PQ+   G  +A+S+VG
Sbjct:  136 GSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVG 309          
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.536e-30
Identity = 70/163 (42.94%), Postives = 106/163 (65.03%), Query Frame = 2
Query:    5 VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL--SLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCIPPAIIVEG 475
            VG V     WA+ L KR  I +  L  ++P+AV H LG++ +N+S   V+VSFTHTIKA+EPFF+   S   LG ++P T W+  S+ P+V GV++AS+TE+SFNW GF+SAM SN++   R++ SKK M      +D+  +++ I++++LF+  P     EG
Sbjct:  140 VGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLG-EVP-TPWVIGSIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNITLFSIITLMSLFLMAPVTFFSEG 300          
The following BLAST results are available for this feature:
BLAST of BQ624301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
TPT_SPIOL1.024e-9190.11Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.252e-8987.36Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR2.789e-8989.56Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA3.643e-8989.01Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR8.973e-8886.81Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.692e-8685.16Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE2.210e-8683.61Triose phosphate/phosphate translocator, chloropla... [more]
GPT1_ARATH2.241e-3845.98Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
GPT2_ARATH9.416e-3744.83Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
TPT2_BRAOB8.536e-3042.94Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01392 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01392 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624301 ID=BQ624301; Name=BQ624301; organism=Citrus sinensis; type=EST; length=550bp
GTTGGTTGGGGTGGTTTACTGTTTGGTGAGCTGGGCTGTGGGCCTTCCCA
AGCGAGCTCCTATTGATTCAAAACTCCTGAAGCTCTTAATCCCTGTTGCT
GTGTGTCATGCATTGGGCCATGTTACCAGCAACGTGTCTTTTGCAGCAGT
TGCTGTCTCCTTTACCCATACCATCAAAGCTCTTGAGCCCTTCTTCAACG
CTGCTGCTTCACAATTCATTCTAGGCCAACAGTTACCTCTGACTCTGTGG
CTGTCTCTTGCTCCTGTGGTTATTGGAGTGTCAATGGCATCATTGACTGA
GCTGTCGTTCAATTGGACGGGCTTCATTAGTGCTATGATTTCCAACATAT
CGTTTACTTACAGGAGTATCTACTCCAAGAAAGCCATGACTGATATGGAC
AGTACTAATATTTATGCCTATATTTCCATCATTGCGCTCTTTGTCTGTAT
TCCACCAGCCATCATTGTTGAGGGACCTCAACTGATTAAGCATGGCTTAA
GTGATGCAATTTCCAAAGTGGGCATGGGCAAGTTCATTTCAGATCTTTTT
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