CB250359

Overview
NameCB250359
Unique NameCB250359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: FER2_RICRI (2Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.787e-37
Identity = 70/106 (66.04%), Postives = 91/106 (85.85%), Query Frame = 1
Query:  142 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 459
            I VTF+  DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI ++ ++YNKL+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +PAATRN
Sbjct:    5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVI-LEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVHLPAATRN 109          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: FER2_RICCN (2Fe-2S ferredoxin OS=Rickettsia conorii GN=fdxB PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.334e-37
Identity = 70/106 (66.04%), Postives = 90/106 (84.91%), Query Frame = 1
Query:  142 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 459
            I VTF+  DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI ++ ++YNKL+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ IPA TRN
Sbjct:    5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVI-LEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRIPATTRN 109          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: FER2_RICMO (2Fe-2S ferredoxin OS=Rickettsia montana GN=fdxB PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.048e-37
Identity = 69/106 (65.09%), Postives = 91/106 (85.85%), Query Frame = 1
Query:  142 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 459
            I VTF+  DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI ++ ++YNKL+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN
Sbjct:    5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVI-LEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRN 109          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: FER2_RICFE (2Fe-2S ferredoxin OS=Rickettsia felis GN=fdxB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 8.869e-37
Identity = 68/106 (64.15%), Postives = 90/106 (84.91%), Query Frame = 1
Query:  142 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 459
            I VTF+  DGEEK ++ P+G+S+LE  H ND++LEGACEGSLAC+TCHVI ++ ++YNKL+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN
Sbjct:    5 IKVTFIVNDGEEKTVEAPIGLSILEITHSNDLDLEGACEGSLACATCHVI-LEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRN 109          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: FER2_RICTY (2Fe-2S ferredoxin OS=Rickettsia typhi GN=fdxB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.370e-36
Identity = 67/112 (59.82%), Postives = 93/112 (83.04%), Query Frame = 1
Query:  142 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 477
            I VTF+  D EEK ++ P+G+S+LE AH N+++LEGACEGSLAC+TCHV+ ++ ++YNKL+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN   +G+
Sbjct:    5 IKVTFIINDEEEKTVEAPIGLSILEIAHSNNLDLEGACEGSLACATCHVM-LEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRNINYNGF 115          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: FER2_RICBR (2Fe-2S ferredoxin OS=Rickettsia bellii (strain RML369-C) GN=fdxB PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 5.748e-36
Identity = 70/106 (66.04%), Postives = 90/106 (84.91%), Query Frame = 1
Query:  142 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 459
            I VTFV  +GEEK I+ P+G+S+LE AH N I+LEGACEGSLAC+TCHVI ++ ++YNKLE P +EE DMLDLAFGLT+TSRLGCQI+ + +LDGI++ +P+ATRN
Sbjct:    5 IKVTFVINNGEEKIIEAPLGLSILEVAHSNSIDLEGACEGSLACATCHVI-LEEEFYNKLEKPKEEEEDMLDLAFGLTDTSRLGCQIILTEKLDGIKVRLPSATRN 109          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: FER2_RICPR (2Fe-2S ferredoxin OS=Rickettsia prowazekii GN=fdxB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.281e-35
Identity = 66/106 (62.26%), Postives = 90/106 (84.91%), Query Frame = 1
Query:  142 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 459
            I VTF+  D EE+ ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHV+ ++ ++YNKL+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN
Sbjct:    5 IKVTFIINDEEERTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVM-LEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRN 109          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADRX_YEAST (Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae GN=YAH1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 5.568e-31
Identity = 67/126 (53.17%), Postives = 92/126 (73.02%), Query Frame = 1
Query:   85 FSTTAENDASHGSN-KQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 459
            FST++  +  H    K  + + +TF+ KDG +K  +V  G ++L+ A  +++++EGAC GS ACSTCHVIV D DYY+ L +P D+ENDMLDLA+GLTETSRLGCQI  S ++DGIR+A+P  TRN
Sbjct:   41 FSTSSFLNHGHLKKPKPGEELKITFILKDGSQKTYEVCEGETILDIAQGHNLDMEGACGGSCACSTCHVIV-DPDYYDALPEPEDDENDMLDLAYGLTETSRLGCQIKMSKDIDGIRVALPQMTRN 165          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADXL_DANRE (Adrenodoxin-like protein, mitochondrial OS=Danio rerio GN=fdx1l PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.055e-29
Identity = 63/130 (48.46%), Postives = 90/130 (69.23%), Query Frame = 1
Query:   88 STTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 477
            S+  E DA    + Q+ ++NV ++D+ G    ++  VG ++L  AH++ I+LEGACE SLACSTCHV V    +Y++L +P + E+DMLD+A  L E SRLGCQI+ +PELDG+ L +P  TRNF VDG+
Sbjct:   66 SSAPEEDA----HAQEHIVNVVYIDRSGRRIPVQARVGDNVLYLAHKHGIDLEGACEASLACSTCHVYVSS-GHYDRLPEPEEREDDMLDMAPLLQENSRLGCQIILTPELDGMELTLPKVTRNFYVDGH 190          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADXH_DROME (Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster GN=Fdxh PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 5.762e-28
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 1
Query:   79 PHFSTTAENDASHGSNKQKD------MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 477
            PH +        HG  + +D      ++N+T+VDKDG+   ++  VG ++L  AH + IE+EGACE SLAC+TCHV V   DY  KL++  ++E+D+LD+A  L E SRLGCQI+    ++G+ L +P ATRNF VDG+
Sbjct:   30 PHNALHTTIPRRHGEFEWQDPKSTDEIVNITYVDKDGKRTKVQGKVGDNVLYLAHRHGIEMEGACEASLACTTCHVYVQH-DYLQKLKEAEEQEDDLLDMAPFLRENSRLGCQILLDKSMEGMELELPKATRNFYVDGH 167          
The following BLAST results are available for this feature:
BLAST of CB250359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
FER2_RICRI1.787e-3766.042Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB... [more]
FER2_RICCN2.334e-3766.042Fe-2S ferredoxin OS=Rickettsia conorii GN=fdxB PE... [more]
FER2_RICMO3.048e-3765.092Fe-2S ferredoxin OS=Rickettsia montana GN=fdxB PE... [more]
FER2_RICFE8.869e-3764.152Fe-2S ferredoxin OS=Rickettsia felis GN=fdxB PE=3... [more]
FER2_RICTY3.370e-3659.822Fe-2S ferredoxin OS=Rickettsia typhi GN=fdxB PE=3... [more]
FER2_RICBR5.748e-3666.042Fe-2S ferredoxin OS=Rickettsia bellii (strain RML... [more]
FER2_RICPR1.281e-3562.262Fe-2S ferredoxin OS=Rickettsia prowazekii GN=fdxB... [more]
ADRX_YEAST5.568e-3153.17Adrenodoxin homolog, mitochondrial OS=Saccharomyce... [more]
ADXL_DANRE3.055e-2948.46Adrenodoxin-like protein, mitochondrial OS=Danio r... [more]
ADXH_DROME5.762e-2844.60Adrenodoxin-like protein, mitochondrial OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionEST0153 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ222 similar to andrenodoxin-like ferredoxin 1 (acc# AAL82812), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250359 ID=CB250359; Name=CB250359; organism=Citrus sinensis; type=EST; length=478bp
ACTCGTCAACATTGGCGACCCTTTATTGAATTACAGTCGGTCCCTAGGGT
TTTCCAAGGGTCCATATTTCAGAAGTATCCACATTTTTCTACCACAGCTG
AAAATGATGCTTCTCATGGAAGCAACAAACAGAAAGACATGATAAACGTG
ACATTTGTTGATAAGGATGGAGAAGAAAAGAACATTAAGGTCCCAGTTGG
AATGTCTATGTTAGAAGCGGCTCATGAAAATGATATAGAACTTGAAGGTG
CATGTGAAGGCTCGCTTGCCTGCTCAACATGTCATGTGATTGTGATGGAC
ATGGACTACTACAATAAATTAGAAGACCCAACTGATGAAGAAAATGACAT
GTTGGATCTTGCTTTTGGGCTTACAGAGACGTCTCGTCTGGGATGTCAAA
TAGTAGCAAGCCCTGAACTTGACGGAATTCGCTTGGCAATTCCTGCTGCC
ACCCGAAACTTTGCTGTAGATGGTTACG
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