CB290273

Overview
NameCB290273
Unique NameCB290273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2896 contig Csv1_Contig2896:492..1322. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_ARATH (Pyridoxal kinase OS=Arabidopsis thaliana GN=PK PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.024e-52
Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = -3
Query:  446 VSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVVAK 829
            V VYREKVVP+ASMLTPNQFEAE+LTG RI SE DGREAC ILHAAGP+KVVITSI I G L LIGSHQKEKG  PEQFKI+I KIPAYFTGTGDLMTALLLGWSNKY DNLD AAELAVS+LQ + +
Sbjct:  140 VHVYREKVVPLASMLTPNQFEAEKLTGLRINSEEDGREACAILHAAGPSKVVITSITIGGILLLIGSHQKEKGLKPEQFKILIHKIPAYFTGTGDLMTALLLGWSNKYPDNLDKAAELAVSTLQALLR 267          

HSP 2 Score: 74.3294 bits (181), Expect = 9.193e-13
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = -2
Query:  180 NSSKCSDNPACTQEALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEKYN 359
            N  K ++    T +ALL+RT++DY  AG+DP SSSLEIRLIQSQ+DIRNP+V+ K+E+Y+
Sbjct:  250 NLDKAAELAVSTLQALLRRTLDDYKRAGYDPTSSSLEIRLIQSQEDIRNPKVELKAERYS 309          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_MOUSE (Pyridoxal kinase OS=Mus musculus GN=Pdxk PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.351e-22
Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = -3
Query:  452 VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGN-----LFLIGSHQKEKGQS---PEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVV 823
            VYR+KVVPVA ++TPNQFEAE L+G +I S+ +  E   +LH  GP  VVITS ++  +     L  +GS +  K       ++ ++ + K+ A F GTGDL  A+LL W++K+ DNL +A E  VS++Q V
Sbjct:  135 VYRDKVVPVADIITPNQFEAELLSGRKIHSQEEAFEVMDMLHCMGPDTVVITSSDLPSSQGSDYLIALGSQRMRKPDGSTVTQRIRMEMRKVEAVFVGTGDLFAAMLLAWTHKHPDNLKVACEKTVSAMQHV 266          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_PIG (Pyridoxal kinase OS=Sus scrofa GN=PDXK PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21
Identity = 59/134 (44.03%), Postives = 83/134 (61.94%), Query Frame = -3
Query:  446 VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINID---GNLFLIG-----SHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVVAK 823
            VYREKVVPVA ++TPNQFEAE LTG RI SE +      +LHA GP  VVITS ++    G  +LI      +   +   + ++ ++ I K+ A F GTGDL  A+LL W++K+ +NL +A E  VS++  V +
Sbjct:  145 VYREKVVPVADIITPNQFEAELLTGRRIHSEEEALAVMDMLHAMGPDTVVITSSDLPSPRGKDYLIALGSQRTRSPDGSVATQRIRMEICKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHVLR 278          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_SHEEP (Pyridoxal kinase OS=Ovis aries GN=PDXK PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.414e-21
Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = -3
Query:  452 VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINI-----DGNLFLIGSHQKEKGQS---PEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVV 823
            VYREKVVPVA ++TPNQFEAE LTG +I S+ +  E   +LH+ GP  VVITS N+        L  +GS +          ++ ++ + K+ A F GTGDL  A+LL W++K+ +NL +A E  VS++  V
Sbjct:  135 VYREKVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHV 266          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_HUMAN (Pyridoxal kinase OS=Homo sapiens GN=PDXK PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.564e-20
Identity = 55/132 (41.67%), Postives = 82/132 (62.12%), Query Frame = -3
Query:  452 VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINI-----DGNLFLIGSHQKEKGQSP---EQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVV 823
            VY+EKVVP+A ++TPNQFEAE L+G +I S+ +      +LH+ GP  VVITS ++        L ++GS ++         E+ ++ I K+ A F GTGDL  A+LL W++K+ +NL +A E  VS+L  V
Sbjct:  135 VYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHV 266          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_BOVIN (Pyridoxal kinase OS=Bos taurus GN=PDXK PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.564e-20
Identity = 55/132 (41.67%), Postives = 82/132 (62.12%), Query Frame = -3
Query:  452 VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINI-----DGNLFLIGSHQ---KEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVV 823
            VYREKVVPVA ++TPNQFEAE LTG +I ++ +  E   +LH+ GP  VVITS ++        L  +GS +    +     ++ ++ + K+ A F GTGDL  A+LL W++K+ +NL +A E  VS++  V
Sbjct:  135 VYREKVVPVADIITPNQFEAELLTGRKIHTQEEALEVMDMLHSMGPDTVVITSSDLLSPRGSDYLMALGSQRTRAPDGSMVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHV 266          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_RAT (Pyridoxal kinase OS=Rattus norvegicus GN=Pdxk PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.043e-20
Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = -3
Query:  452 VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINI-----DGNLFLIGSHQKEKGQS---PEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVV 823
            VYREKVVP+A ++TPNQFEAE L+G +I S+ +      +LH  GP  VVITS ++        L  +GS +  K       ++ ++ + K+   F GTGDL  A+LL W++K+ DNL +A E  VS++Q V
Sbjct:  135 VYREKVVPMADIITPNQFEAELLSGRKIHSQEEAFAVMDVLHRMGPDTVVITSSDLPSPKGSDYLMALGSQRMRKPDGSTVTQRIRMEMRKVDPVFVGTGDLFAAMLLAWTHKHPDNLKVACEKTVSAMQHV 266          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_DICDI (Pyridoxal kinase OS=Dictyostelium discoideum GN=pykA PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = -3
Query:  461 VSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGN---LFLIGS--HQKEKGQSPEQFKIVI-PKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSL 829
            V VY+ +V+P A  + PNQ E E LTG +I ++ D  +A    H  G   VVITS+  D N   + +IGS  +  +      QFKI + PK   Y+TGTGDL+++LLLGWS +   +L +  E A+S L
Sbjct:  128 VEVYKNEVIPNADYIFPNQTEVEFLTGIKIKNDQDALKAIDQFHKMGVKNVVITSLFFDTNPNDIIVIGSTINDDDNNNKYNQFKIKVGPKFNDYYTGTGDLLSSLLLGWSIREPTDLSLVCEKAISIL 256          
BLAST of CB290273 vs. ExPASy Swiss-Prot
Match: PDXK_CAEEL (Putative pyridoxal kinase OS=Caenorhabditis elegans GN=F57C9.1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11
Identity = 40/126 (31.75%), Postives = 66/126 (52.38%), Query Frame = -3
Query:  446 VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVVAK 823
            VYR+ ++P+A +LTPN FE  +LTG  I +E D   A   LHA G   VV+TS  + G             +    ++   P++   F GTGD  T+LL+ W ++   ++  A +  ++S+Q + +
Sbjct:  152 VYRDLIIPLADVLTPNAFELGELTGSPIETEEDCLRAVNELHAKGVKTVVVTS-GVTGAQTNESLRCYASVKGSHVYRFTFPRLVGQFVGTGDTFTSLLVVWLDELNGDVSEAVKRVLASMQCLIR 276          
The following BLAST results are available for this feature:
BLAST of CB290273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PDXK_ARATH2.024e-5282.03Pyridoxal kinase OS=Arabidopsis thaliana GN=PK PE=... [more]
PDXK_MOUSE6.351e-2243.18Pyridoxal kinase OS=Mus musculus GN=Pdxk PE=1 SV=1[more]
PDXK_PIG1.083e-2144.03Pyridoxal kinase OS=Sus scrofa GN=PDXK PE=1 SV=1[more]
PDXK_SHEEP2.414e-2143.18Pyridoxal kinase OS=Ovis aries GN=PDXK PE=1 SV=1[more]
PDXK_HUMAN1.564e-2041.67Pyridoxal kinase OS=Homo sapiens GN=PDXK PE=1 SV=1[more]
PDXK_BOVIN1.564e-2041.67Pyridoxal kinase OS=Bos taurus GN=PDXK PE=2 SV=1[more]
PDXK_RAT2.043e-2041.67Pyridoxal kinase OS=Rattus norvegicus GN=Pdxk PE=1... [more]
PDXK_DICDI2.114e-1741.09Pyridoxal kinase OS=Dictyostelium discoideum GN=py... [more]
PDXK_CAEEL1.327e-1131.75Putative pyridoxal kinase OS=Caenorhabditis elegan... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290273 ID=CB290273; Name=CB290273; organism=Citrus sinensis; type=EST; length=831bp
TTTTTTTTTTTTTTACAAGCAACCAGCGTTACATCGCTGCTCTCGGCTCT
TTTATGTGAACAAGAACATATAAAGTAACATTTTTGCGTTTAAATAACCA
AAACTGTCAAAAATAAATAGTACAAATGCACCCTATAGAAATTGATTCTG
TTTCAATCAGTATAAATATCATCCATTCAGTTGTATTTTTCAGACTTGAA
TTTCACTTGTGGGTTCCGAATGTCATCCTGGCTCTGGATCAATCGGATCT
CCAAACTACTTGATTGGGGATCGAATCCAGCGGTAACGTAGTCATTCACC
GTCCTCTGTAAAAGAGCCTCTTGAGTGCAGGCTGGATTATCACTACATTT
CGAGCTGTTCTAGACAAGAACAAACTTGTTCCTGAAGGGAAAGCCCGGTC
AATTTGGTCTCATCAGTGGAAGTAAGAGGTCAAGAATTCAATTCCCTTTG
CAACAACCTGCAAACTTGATACTGCAAGCTCAGCAGCAATGTCAAGGTTG
TCCCTATATTTATTACTCCATCCAAGCAGGAGTGCAGTCATTAGATCACC
AGTTCCTGTAAAATATGCAGGAATTTTGGGTATCACAATCTTGAACTGCT
CCGGAGACTGACCCTTTTCCTTCTGATGACTGCCAATCAGGAAAAGATTG
CCATCTATATTTATGCTTGTGATCACAACCTTTGCAGGTCCAGCAGCATG
AAGAATCTTACAAGCTTCCCTCCCATCTGCTTCACTCCCAATCCTGAAAC
CAGTCAACTGTTCTGCTTCAAACTGATTAGGGGTCAACATTGAGGCCACT
GGAACAACCTTCTCACGGTATACTGATACTA
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