CB290277

Overview
NameCB290277
Unique NameCB290277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:1313..2165. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.876e-101
Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIV SRKDSLQ FKKPWAHEHEPV +LLDAVKVIKPT+LIGSSGVG+ FTKEVIEAMAS NEKPLILALSNPTSQSECTAEEAYTW++GRAIFASGSPFDP EYNGK FVPGQANNAYIFPG G+GLVISGAIRVHD+MLLAASEALA+QVT+ENF+KGLIYPPFSNIR             AYELG+ATRLP+P+NLVK AESCMY+PVYR+YR
Sbjct:  373 DSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 353.599 bits (906), Expect = 8.157e-97
Identity = 175/219 (79.91%), Postives = 189/219 (86.30%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIVSSRK+SLQHFKKPWAHEHEPV  LL+ VK IKP +LIG+SGVG+TFTKEVIEAMASFNEKPLILALSNPTSQSECTA+EAYTW+KG+AIFASGSPFDP EY GKVFVPGQ+NNAYIFPG GLGLVISGAIRVHDDMLLAA+EALA Q+ EE   KGLIYPP SNIR             AYELG+ATRLPRP+NLVK AESCMY+P YR YR
Sbjct:  373 DSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.373e-96
Identity = 170/219 (77.63%), Postives = 192/219 (87.67%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIV SR DSLQHFKKPWAH+HEPVN  LDAVK IKPT+LIGSSG G+TFTKEV+EAM+SFNEKP+ILALSNPTSQSECTAE+AYTWS+GR IFASGSPF P EYNGKV+V GQ+NNAYIFPGFGLGL+ISGAIRVHD+MLLAASEALA+QVT+E+F+ GLIYPPF+NIR             AYELG+A+RLP+P+NLV  AESCMY+P YRNYR
Sbjct:  429 DSKGLIVRSRLDSLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.302e-94
Identity = 170/219 (77.63%), Postives = 190/219 (86.76%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIVSSR +SLQ FKKPWAHEHEPV  LL+AVK IKPT+LIGSSG G+TFTKEV+E MAS NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDP EY GK+FVPGQANNAYIFPGFGLGL++SGAIRV D+MLLAASEALA QV+EEN++KGLIYPPF+NIR             AY+LG+A+ L RP++LVK AESCMY+P YR+YR
Sbjct:  371 DSKGLIVSSRLESLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 1.302e-94
Identity = 167/219 (76.26%), Postives = 191/219 (87.21%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIV+SRK+SLQ FKKPWAHEHEPV  LLDAV+ IKPT+LIG+SGVG+TFTKEVIEAMASFNE+P+I +LSNPTS SECTAEEAY WS+GRA+FASGSPFDP EYNGK+ VPGQ+NNAYIFPGFGLG+VISGA+RVH+DMLLAASE LA Q T+ENFEKG I+PPF+NIR             AYELG+ATRLP+P++L K AESCMYTPVYR+YR
Sbjct:  421 DSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.881e-93
Identity = 165/219 (75.34%), Postives = 190/219 (86.76%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIV SR DSLQHFKKPWAH+HEPVN  LDA+K I+PT+LIGSSG G+TFTKEV+E M+S NEKP+ILALSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EYNGK++V GQANNAYIFPGFGLGL+ISGAIRVHDDMLLAASEA A+QVT+E+F+KGLI+PPF++IR             AYELG+A+RLP+P+NLV  AESCMY+P YR YR
Sbjct:  430 DSKGLIVRSRLDSLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.002e-91
Identity = 162/219 (73.97%), Postives = 186/219 (84.93%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIV SRK SLQ FKKPWAHEHEP+  L DAV+ IKPT+LIG+SGVGRTFTKE+IEAM+SFNE+P+I +LSNPTS SECTAE+AYTWS+GR+IFASGSPF P EY GK FVPGQ+NNAYIFPG GLGLVISGA+RVH+DMLLAAS+ALA Q T++NFEKG I+PPF++IR             AYELG+ATRLP P +LVK AE+CMYTPVYRNYR
Sbjct:  418 DSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.946e-90
Identity = 161/219 (73.52%), Postives = 184/219 (84.02%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGL+VSSRK++LQ FK PWAHEHEP+  L+DAV+ IKPT+LIG+SG G+ FTKEV+EAMA+ N KPLILALSNPTSQSECTAEEAYTWS+G AIFASGSPFDP EY G+ FVPGQANNAYIFPGFGLGL++ GAIRVHDDMLLAASEALA QVT E+F KGLIYPPF +IR             AYELG+A+RLP+P +LVK AESCMY P YR++R
Sbjct:  367 DSKGLVVSSRKETLQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 2.542e-90
Identity = 163/219 (74.43%), Postives = 186/219 (84.93%), Query Frame = -1
Query:  197 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            DSKGLIV SR + LQHFK+PWAH+HEPV  L++AVK IKPT+LIGSSG GRTFTKEV++AMA+FNEKP+I ALSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EYNGKV+  GQANNAYIFPGFGLGL+ISGAIRVHDDMLL ASEALA +V++ENFEKG   PPFSNIR             AYELG+ATRLP+P++LV  AESCMY+P YR+YR
Sbjct:  356 DSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIR-KISAHIAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573          
BLAST of CB290277 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.358e-50
Identity = 100/219 (45.66%), Postives = 143/219 (65.30%), Query Frame = -1
Query:  200 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNY 853
            DSKGLIV  R  SL   K  +AHEH  + NL D VK IKP++LIG + +G  FTKE+++ MA+FN++P+I ALSNPTS++ECTAE+ Y +++GR IFASGSPFDP    NGK   PGQ NN+Y+FPG  LG++  G   + +D+ L  +E +A+QV+EEN ++G +YPP   I+             AY    A+  P+P++L    +S +Y+  Y ++
Sbjct:  324 DSKGLIVKGRA-SLTAEKTRFAHEHAEMKNLEDIVKDIKPSVLIGVAAIGGAFTKEILQDMAAFNKRPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAEVIAEQVSEENLQEGRLYPPLVTIQHVSLKIAVRIAEEAYRNNTASTYPQPKDLEAFIQSQIYSTDYNSF 541          
The following BLAST results are available for this feature:
BLAST of CB290277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_VITVI1.876e-10183.11NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_POPTR8.157e-9779.91NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLAPR2.373e-9677.63NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU1.302e-9477.63NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_ORYSJ1.302e-9476.26NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLATR1.881e-9375.34NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_MAIZE3.002e-9173.97NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MESCR1.946e-9073.52NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_SOLLC2.542e-9074.43NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_ANAPL3.358e-5045.66NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290277 ID=CB290277; Name=CB290277; organism=Citrus sinensis; type=EST; length=853bp
TTTTTTTATCACCAGTATCATGAAAAATATTCTTCAACCATGTAGGCAGT
GGTCCAACACCTTCATTTGATAAGTACACATATACAGCAATACTTACACA
AGTACAAAAGCCACCATAACACACCAAAACAAGTTATTTGACATTATTTT
TGCTTAAAGACACTCAGCGGAGACAGAAATTTTGGCAGAACATTTAACGA
TAGTTTCGGTAGACAGGGGTATACATGCAACTTTCAGCGCACTTCACTAG
ATTCTGAGGTCGAGGGAGACGCGTAGCCACGCCTAGTTCATATGCCTTAG
CAGCAACATTAGCAGCTATATTGGCTGAAATTTTTCTAATATTAGAAAAT
GGTGGGTAGATCAATCCCTTCTCAAAGTTCTCTTCTGTCACTTGTTTTGC
CAAGGCTTCCGAGGCTGCCAAAAGCATGTCGTCATGTACCCGAATTGCTC
CAGAGATGACCAAACCCAAACCAAATCCAGGGAAGATGTAAGCATTGTTG
GCCTGGCCAGGAACAAAAACTTTTCCATTGTATTCAAAAGGATCAAATGG
ACTTCCACTAGCGAAAATTGCACGACCCTTACTCCAAGTGTAAGCTTCTT
CAGCTGTACATTCTGACTGTGAGGTTGGGTTGGAGAGAGCCAGGATGAGA
GGTTTCTCATTGAAGGAGGCCATGGCCTCGATTACTTCTTTTGTAAAAGT
TCTTCCAACTCCAGATGATCCAATCAAAATTGTTGGCTTGATTACCTTGA
CAGCATCTAAGAGATTGTTGACAGGCTCATGTTCATGAGCCCAAGGCTTC
TTGAAGTGTTGAAGTGAATCTTTCCGGGAGCTGACTATCAGTCCCTTTGA
GTC
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