CB290313

Overview
NameCB290313
Unique NameCB290313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3096 contig Csv1_Contig3096:21..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.528e-89
Identity = 166/203 (81.77%), Postives = 175/203 (86.21%), Query Frame = 1
Query:  133 MACASFAKLNAASSQWIGQQSFTQRTGSSSSTRFATRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASW 741
            MA ASF K N  SS WIGQ+SF   + SSS       RVS  IRAGAY++ELVKTAK+IASPGRGILAIDESNATCGKRLASIGLDNTE NRQAYRQLLLTTPGLGDYISG+ILFEETLYQST DGK FVDCLR+  IVPGIKVDKGL PL GSN ESWCQGLDGLASRS EYYKQGARFAKWRTVVS+PCGPSALAVKEA+W
Sbjct:    1 MASASFVKPNTLSSPWIGQRSFAHTSASSSPPP----RVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKEAAW 199          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 6.337e-76
Identity = 145/189 (76.72%), Postives = 157/189 (83.07%), Query Frame = 1
Query:  187 QQSFTQRTGSSSSTRFATR----RVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASW 741
            + SF  +     +TR A       VS+ +RAGAY +ELVKTAKTIASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISGAILFEETLYQST DGKK VD L E+KIVPGIKVDKGLVPL GSNNESWCQGLDGLASR   YY+QGARFAKWRTVVSIP GPS LAVKEA+W
Sbjct:    8 KSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKEAAW 196          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 276.944 bits (707), Expect = 7.747e-74
Identity = 143/204 (70.10%), Postives = 162/204 (79.41%), Query Frame = 1
Query:  133 MACASFAKLNAASSQWIGQQSFTQRTGSSSSTRFA-TRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASW 741
            MA AS  K +         +  T R  S +  RF  +   S+ +RA +Y +ELVKTAKT+ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL++ PGLG Y+SGAILFEETLYQSTTDGKK VD L E+ IVPGIKVDKG +PLPGSN+ESWCQGLDGLA RS  YY+QGARFAKWRTVVSIP GPSALAVKEA+W
Sbjct:    1 MASASLLKTSPVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAW 204          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.012e-73
Identity = 144/206 (69.90%), Postives = 164/206 (79.61%), Query Frame = 1
Query:  133 MACASFAKLNAA--SSQWIGQQSFTQRTGSSSSTRFATRRVSVPIRAGA-YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASW 741
            MA  S  K +     S+W+  QS   R  SS+S     R  S+ +RA + Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SIGL+NTE NRQA+R LL++ PGLG Y+SGAILFEETLYQSTT+GKK VD L E+ IVPGIKVDKGLVPL GSNNESW QGLDGL+SR+  YY+QGARFAKWRTVVSIP GPSALAVKEA+W
Sbjct:    1 MASTSLLKASPVLDKSEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAW 206          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.321e-73
Identity = 144/202 (71.29%), Postives = 162/202 (80.20%), Query Frame = 1
Query:  142 ASFAKLNAASSQWIGQQSFTQRTGSS-SSTRFATRRVSVPIRAG-AYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASW 741
            A+  K +   S W+  QS   R  SS S+ R      ++ +RA  AY +ELVKTAKTIASPG GI+A+DESNATCGKRLASIGL+NTE NRQAYR LL++ PGLG YISGAILFEETLYQSTTDGKK VD L E+ IVPGIKVDKGLVPL GS +ESWCQGLDGLASR+  YY+QGARFAKWRTVVSIP GPSALAVKEA+W
Sbjct:    6 ATMLKASPVKSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAW 207          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.944e-73
Identity = 135/161 (83.85%), Postives = 148/161 (91.93%), Query Frame = 1
Query:  259 IRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASW 741
            IRAG+Y +ELVKTAKTIASPGRGILA+DESNATCGKRLASIGL+NTE NRQA+R LL+T P LG+YISGAILFEETLYQSTTDG+K VD L E+ I+PGIKVDKGLVPL GSN+ESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKEA+W
Sbjct:    4 IRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAW 164          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.700e-71
Identity = 131/158 (82.91%), Postives = 143/158 (90.51%), Query Frame = 1
Query:  268 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASW 741
            G+Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SIGL+NTE NRQA+R LL+T P LG+YISGAILFEETLYQST DG+K VD L E+ I+PGIKVDKGLVPL GSNNESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKEA+W
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAW 158          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.957e-57
Identity = 111/151 (73.51%), Postives = 126/151 (83.44%), Query Frame = 1
Query:  268 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSAL 720
            G Y EEL+KTA T+AS GRGILA+DESNATCGKRL SIG++NTE NR+AYR+LL+T PGLG YISGAILFEETLYQST  GKKFVD ++E+ IVPGIKVDKGLVP P +   SWC GLDG  S + EYYK GARFAKWR+VVSIP GPS +
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVPCP-TPTMSWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPSIM 176          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 94/154 (61.04%), Postives = 114/154 (74.03%), Query Frame = 1
Query:  274 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKE 732
            Y +EL+KTAK IA+PGRGILA DES  T GKR A I ++NTE+NRQAYR+LL T+PG    +SG ILFEETLYQ T+DGK FVD L E  ++PGIKVDKGLV L G+N E+  QGLD L +R  +YY+ GARFAKWR    I    PS L+++E
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQE 161          
BLAST of CB290313 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.988e-45
Identity = 89/156 (57.05%), Postives = 116/156 (74.36%), Query Frame = 1
Query:  268 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKE 732
            G Y +EL+K AK IA+PG+GILA DES  T GKRLASI ++N E NRQA R+LL T+P    Y+SG ILFEETLYQ +++GK FV+ L+E  ++PGIKVDKG+V L G++ E+  QG D L +R  +YYK GARFAKWR V+ I P  PS L++++
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQ 161          
The following BLAST results are available for this feature:
BLAST of CB290313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC3_ARATH6.528e-8981.77Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_ORYSJ6.337e-7676.72Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC_SPIOL7.747e-7470.10Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC2_ARATH1.012e-7369.90Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH1.321e-7371.29Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC1_PEA2.944e-7383.85Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_PEA4.700e-7182.91Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_CHLRE2.957e-5773.51Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ARATH1.054e-4661.04Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA1.988e-4557.05Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ag03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ag03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290313 ID=CB290313; Name=CB290313; organism=Citrus sinensis; type=EST; length=743bp
GCCCTTATGCTTTCCTTTGATATAACAAAAGCCAAAACCACGCCAAAACT
CTGACTCCACCTCCGAAGAAAAAGTGCAACTGATCTTAGAAGGCCACGAA
AAGTCGGATCCTCGAAATAATCACAAGCAACAATGGCCTGTGCAAGTTTT
GCGAAGCTAAATGCTGCGTCGTCTCAGTGGATCGGTCAACAGTCCTTCAC
TCAACGCACCGGATCTTCTTCTTCGACTCGATTCGCGACTCGCCGCGTCT
CCGTACCGATCCGAGCTGGTGCTTACACTGAGGAACTCGTCAAAACCGCT
AAAACAATTGCATCACCTGGTCGCGGTATTCTAGCAATTGATGAATCAAA
TGCAACCTGTGGGAAGAGGTTGGCATCGATTGGATTGGACAATACAGAGA
CCAATAGACAGGCTTACAGGCAACTTTTGCTGACCACTCCAGGCCTTGGT
GATTATATTTCTGGTGCCATTCTTTTCGAGGAGACACTGTACCAATCAAC
TACAGATGGAAAAAAGTTTGTGGACTGCTTGCGTGAGGAAAAGATCGTGC
CTGGCATTAAAGTTGACAAGGGTTTGGTTCCTCTACCAGGATCAAACAAT
GAATCGTGGTGCCAAGGCTTGGATGGATTGGCATCAAGATCCACTGAATA
CTACAAGCAAGGTGCTCGATTTGCTAAGTGGAGGACAGTTGTTAGCATTC
CATGTGGTCCTTCTGCTCTGGCTGTGAAGGAAGCTTCATGGGG
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