CB290341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.720e-39 Identity = 80/108 (74.07%), Postives = 89/108 (82.41%), Query Frame = 1 Query: 103 TFVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 +F I C KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT+TREK+KITVT+D FS HNVRDWLRVIA+NKDR++YELRYFNIAENEGEEED Sbjct: 17 SFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.484e-38 Identity = 78/108 (72.22%), Postives = 88/108 (81.48%), Query Frame = 1 Query: 103 TFVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 +F I C KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSV++TREK+KITVT+D FS HNVRDWLRVIA+NKDR++YELRYFNIAENE EEED Sbjct: 17 SFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEAEEED 124
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27 Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 103 TFVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 +FVI C KPV+D I++IA+LEKFLQERIKV GKAGALG+SV++TR KI V ++SNFS +N+RDWLRVIASNKD++VYE+RYF I + E+ Sbjct: 19 SFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_RAT (60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.120e-22 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_PIG (60S ribosomal protein L22 OS=Sus scrofa GN=RPL22 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_MOUSE (60S ribosomal protein L22 OS=Mus musculus GN=Rpl22 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_MACFA (60S ribosomal protein L22 OS=Macaca fascicularis GN=RPL22 PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_HUMAN (60S ribosomal protein L22 OS=Homo sapiens GN=RPL22 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_ICTPU (60S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 58/108 (53.70%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FLQERIKV GKAG LG V++ R K+KITVTSD FS +N+RDWLRV+A+ K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_CHICK (60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEE+ Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEEE 126 The following BLAST results are available for this feature:
BLAST of CB290341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290341 ID=CB290341; Name=CB290341; organism=Citrus sinensis; type=EST; length=661bpback to top |