CB290360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 420.239 bits (1079), Expect = 7.392e-117 Identity = 198/223 (88.79%), Postives = 214/223 (95.96%), Query Frame = -3 Query: 206 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 874 QIRKMKGLKQKKAHLMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A TEFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTT EK +++G+LKA Sbjct: 167 QIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 408.683 bits (1049), Expect = 2.226e-113 Identity = 191/221 (86.43%), Postives = 211/221 (95.48%), Query Frame = -3 Query: 212 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 874 QIRKMKGLKQKKAH+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+H+AMTE+DRTEKD+TPMGGFPHYG+V +DYL+IKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKFIDT+S FGHGRFQT+ EK ++Y R+ Sbjct: 167 QIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRV 387
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 406.757 bits (1044), Expect = 8.458e-113 Identity = 189/220 (85.91%), Postives = 209/220 (95.00%), Query Frame = -3 Query: 215 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 874 QIRKMKGLKQKKAHL EIQ+NGG +A+KVD+A FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK QE+HSAMTE+DRTEKDITPMGGFPHYG+V EDYL+IKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKFID +S GHGRFQT+QEKAK+YGR Sbjct: 167 QIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGR 386
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 312.383 bits (799), Expect = 2.171e-84 Identity = 146/225 (64.89%), Postives = 186/225 (82.67%), Query Frame = -3 Query: 209 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 874 Q++ MK ++KKAH+MEIQ+NGG+VA+KVD+A EKQ+P+D+VF +DEMID IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY+LGK+ + + T++D TEK + PMGGFPHYG+VN+D+++I+GCCVG KKR +TLR+SL+ QT R A E+I LK+IDTSSKFGHGRFQT EK + G+LK Sbjct: 167 QMKVMKH-REKKAHIMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 390
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 303.908 bits (777), Expect = 7.721e-82 Identity = 145/221 (65.61%), Postives = 180/221 (81.45%), Query Frame = -3 Query: 209 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 853 L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+FTVARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 173 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3) HSP 1 Score: 302.368 bits (773), Expect = 2.246e-81 Identity = 144/221 (65.16%), Postives = 180/221 (81.45%), Query Frame = -3 Query: 209 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 853 L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 173 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 2.934e-81 Identity = 144/221 (65.16%), Postives = 180/221 (81.45%), Query Frame = -3 Query: 209 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 853 L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 173 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 301.597 bits (771), Expect = 3.832e-81 Identity = 146/228 (64.04%), Postives = 178/228 (78.07%), Query Frame = -3 Query: 209 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 874 QIR +K +QKKAH+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G ++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R ALE+IKLKFIDTSSK GHGRFQT +K + G LK Sbjct: 167 QIRLIKQ-RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 301.597 bits (771), Expect = 3.832e-81 Identity = 143/221 (64.71%), Postives = 179/221 (81.00%), Query Frame = -3 Query: 209 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 853 L+QKKAHLME+QVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 173 LRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
BLAST of CB290360 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 2.484e-80 Identity = 145/222 (65.32%), Postives = 177/222 (79.73%), Query Frame = -3 Query: 209 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 874 Q+RK L QKKAHL EIQ+NGGSV++KVD+A FEK + +D+VF+++EMID+I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N K+Y++GK E ++A TEFDRT+K ITPMGGF HYG VN D++++KG G +KRVVTLR+SL TSR ALEE+ LK+IDT+SKFG GRFQT EK + G LK Sbjct: 166 QVRKTP-LVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAA-TEFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385 The following BLAST results are available for this feature:
BLAST of CB290360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290360 ID=CB290360; Name=CB290360; organism=Citrus sinensis; type=EST; length=876bpback to top |