CB290388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290388 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.014e-17 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 2 Query: 212 IDGVATKDIHINPSSCLTLRIFLPNTVVESSLADAHVYKGYAPVTAGRNRHKKLPVMLQFHGGGFVSGSNDSVANDAFCRRIAKLCDVIVVAVGYRLAPESRYPSSFEDGLNVLNWIKKQ 571 +DGV + D H++ ++ L RI+ P +++ + G +T + + +PV++ FHGG F S +S D FCRR+ +C V+VV+V YR +PE RYP +++DG N LNW+K + Sbjct: 60 LDGVFSFD-HVDSTTNLLTRIYQPASLLHQTR------HGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSR 172
BLAST of CB290388 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.949e-14 Identity = 44/137 (32.12%), Postives = 68/137 (49.64%), Query Frame = 2 Query: 197 SNPTFIDGVATKDIHINPSSCLTLRIFLPNTVVESSLADAHVYKGYAPVTAGRNRHKKLPVMLQFHGGGFVSGSNDSVANDAFCRRIAKLCDVIVVAVGYRLAPESRYPSSFEDGLNVLNWIKKQANLAQLGNRHGK 607 +N ++GV++ D I+ S L +RI+ ++ A V + + PV++ FHGG FV S S D+ CRR KL +VV+V YR APE RYP +++DG L W+ Q + G+ + Sbjct: 55 ANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQAR 191
BLAST of CB290388 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.548e-13 Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 197 SNPTFIDGVATKDIHINPSSCLTLRIFLPNTVVES-SLADAHVYKGYAPVTAGRNRHKKLPVMLQFHGGGFVSGSNDSVANDAFCRRIAKLCDVIVVAVGYRLAPESRYPSSFEDGLNVLNWIKKQA 574 +N ++GV + D+ I+ + L R++ P S S+ D PV + +PV++ FHGG F S +S D CRR+ LC +VV+V YR APE+RYP +++DG VL W+ + Sbjct: 55 ANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQ-----NPVDG-----EIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS 171
BLAST of CB290388 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.003e-12 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 2 Query: 191 MASNPTFIDGVATKDIHINPSSCLTLRIFLPNTVVES---SLADAHVYKGYAPVTAGRNRHKKLPVMLQFHGGGFVSGSNDSVANDAFCRRIAKLCDVIVVAVGYRLAPESRYPSSFEDGLNVLNWIKKQA 574 + +N +DGV + D+ I+ L R++ P + S+ D PV +PV+L FHGG F S +S D CRR+ LC +VV+V YR APE+ YP +++DG LNW+ ++ Sbjct: 53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLE-----KPVDGDI-----VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS 173 The following BLAST results are available for this feature:
BLAST of CB290388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290388 ID=CB290388; Name=CB290388; organism=Citrus sinensis; type=EST; length=746bpback to top |