CB290446

Overview
NameCB290446
Unique NameCB290446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.709e-73
Identity = 133/195 (68.21%), Postives = 159/195 (81.54%), Query Frame = -2
Query:  272 VKGTPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFF-AGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLPIPGTSKIKNLDDNI 853
            V G P YVR+ CE SLKRLD+D IDLY+QHRVDT VPIE TVGELKKLVEEGK+KYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD+EEEI+P CRELGIGIV YSP+GRGF  +G  ++E +  + +    PRF+ ENLE NKN+Y RI  +A +  CTP+QLALAW+  QG+DV PIPGT+KI+NL+ N+
Sbjct:  107 VHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKYLPRFQAENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNM 301          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 7.184e-57
Identity = 106/153 (69.28%), Postives = 123/153 (80.39%), Query Frame = -2
Query:  398 VKGTPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFF-AGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRI 853
            + G P YVR+ CEGS KRL VD IDLY+QHR+D  VPIE T+GELKKLVEEGKIKYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD EE+I+P CRELGIGIV YSP+GRGFF +G  +V+SL    F    PRF+ ENL+KN  I+ R+
Sbjct:  102 IHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDFRKHMPRFQPENLDKNAQIFERV 254          

HSP 2 Score: 24.6386 bits (52), Expect = 7.184e-57
Identity = 9/25 (36.00%), Postives = 15/25 (60.00%), Query Frame = -1
Query:  303 QMHSCTISTGMDSPTRRRCPTYPWN 377
            +MH+ T   G+ SP R+R   + W+
Sbjct:  262 RMHAITARVGLGSPPRKRRLPHTWH 286          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.055e-51
Identity = 105/222 (47.30%), Postives = 145/222 (65.32%), Query Frame = -2
Query:  188 PDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE---IVPLCRELGIGIVPYSPIGRGFFAGK-AVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLPIPGTSKIKNLDDNIGSLALKLTKEDLKEIADAVPIQEVEGDR 841
            PDY+    + SLKRL +D IDLY+ HR     PIE  +G LKK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I IV Y+P+GRGF  G     +  P   F    PR+++EN  KN  +  +I+ +A  +  TP QL+LAW+L QGDD+LPIPGT ++K L++N G+L +KL+   +KEI +A    EV G R
Sbjct:  101 PDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDFRRKAPRYQKENFYKNLELVTKIEKIATANNITPGQLSLAWLLAQGDDILPIPGTKRVKYLEENFGALKVKLSDATVKEIREACDNAEVIGAR 322          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.077e-32
Identity = 89/235 (37.87%), Postives = 128/235 (54.47%), Query Frame = -2
Query:  173 GTPDYVRSCCEGSLKRL-DVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE-IVPLCRELGIGIVPYSPIGRGFFAGK-AVVESLPADSFVASHP------RFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDD-VLPIPGTSKIKNLDDNIGSLALKLTKEDLKEIADAVPIQEVEGDRTYESM 847
            G PD+V    E  +  L     +DL+   RVD +VPIE T+  LK  V+ GKI  +GLSE S +TI+RAHAV PI AV++E+SL++RDIE   I+ +CR+L I I+ YSP  RG   G+   VE L    F  S P      RF  +   KN      ++ LAKK   T  + +L +I+  G+  V+PIPG++ +     N+ +L   L+ E  KE  + +    + G R  E +
Sbjct:   95 GNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVEDL--KEFAKSFPFLEYLDRFSPDVFAKNLPFLQAVEQLAKKFGMTMPEFSLLFIMASGNGLVIPIPGSTSVSRTKSNLNALNKSLSPEQFKEAKEVLSKYPIYGLRYNEQL 327          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.130e-29
Identity = 72/206 (34.95%), Postives = 116/206 (56.31%), Query Frame = -2
Query:  221 DYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLPIPGTSKIKNLDDNIGSLALKLTKEDLKEIAD 838
            +++RS  E SLKRL  DYIDLY+ H  D   P+ +  G LK+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E+E++P C + GI  +PY P+  G   GK   +++  D F    P+F+ E    N     ++  +A++ +   A +ALAW+L +      IPG  + + L DN+ +L ++LT++++  I+D
Sbjct:  103 EFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFTQDTV-FDDFRKDKPQFQGETFIHNLKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRPEQLQDNLKTLNIELTEDEVNFISD 307          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.018e-27
Identity = 76/228 (33.33%), Postives = 127/228 (55.70%), Query Frame = -2
Query:  188 GTPDYVRSCCEGSLKRL-DVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE-IVPLCRELGIGIVPYSPIGRGFFAGKA-----VVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDD-VLPIPGTSKIKNLDDNIGSLALKLTKEDLKEIADAVPIQEVEGDR 847
            G P+ V    + +L RL     +DL+   RVD  VPIE T+  LK  V+ G+I  +GLSEAS ++I+RA A+ PI AV+ E+SL++RDIE+  I+  C +L I I+ Y+P   G   G+      + + + A  F+ +  +F  +  EKN      ++ LA+K   +  + AL +I+  G   ++PIPG++ ++  + N+ +L   L+ E L+E    +   ++ G R
Sbjct:   95 GDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAEDLKDFIKAFPFLRNMDKFNPKVFEKNIPFLKAVEQLAQKFGMSMPEFALNFIIANGKGMIIPIPGSTTVQRAESNLSALKKSLSSEQLEEAKKVLDKHQIFGLR 322          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.880e-25
Identity = 69/216 (31.94%), Postives = 119/216 (55.09%), Query Frame = -2
Query:  215 TPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTS---VPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLPIPGTSKIKNLDDNIGSLALKLTKED---LKEIADAV 844
            +P+ +R     SL+RL +DYID+Y  H         PI +TV  L +L  EGKI+ IG +    D IR       +  +Q ++S+  R +E E++PLCR+ GI +  YSP+ +G   G    + +P  +  A+   F+ EN+ K  ++  +   L  +++CT   LALAWIL+Q D +  + G +  + + +N+ +L + L+  D   ++E+A+A+
Sbjct:  110 SPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGA-RANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEAL 324          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: NORA_ASPFL (Norsolorinic acid reductase OS=Aspergillus flavus GN=norA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.880e-25
Identity = 63/213 (29.58%), Postives = 115/213 (53.99%), Query Frame = -2
Query:  212 VRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLPIPGTSKIKNLDDNIGSLALKLTKEDLKEIADAVP 832
            +R   + SL++L  DYIDL + H  D +  +E+ +  L  LV  GK+ Y+G+S+         +   RA+ + P +  Q  WS   RD E +I+P+C   G+G+ P+  +GRG F          A+ F     +   ++ EK++ +  ++D +A++       +A A+++ +   V P+ G  K+++L +NI +L L L++E+++EI DA P
Sbjct:  126 LRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSCAFRDFERDILPMCESEGMGLAPWGVLGRGQFRS--------AEEFSREGRKMGPQD-EKHRRLGEKLDQMAQQKNTKATSIAQAYVMHKAPYVFPVIGGRKVEHLKENIEALGLVLSEEEIREIDDAEP 329          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: NORA_ASPPA (Norsolorinic acid reductase OS=Aspergillus parasiticus GN=norA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.761e-25
Identity = 63/213 (29.58%), Postives = 115/213 (53.99%), Query Frame = -2
Query:  212 VRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVESLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLPIPGTSKIKNLDDNIGSLALKLTKEDLKEIADAVP 832
            +R   + SL++L  DYIDL + H  D +  +E+ +  L  LV  GK+ Y+G+S+         +   RA+ + P +  Q  WS   RD E +I+P+C   G+G+ P+  +GRG F          A+ F     +   ++ EK++ +  ++D +A++       +A A+++ +   V P+ G  K+++L +NI +L L L++E+++EI DA P
Sbjct:  126 LRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSSAFRDFERDILPMCESEGMGLAPWGVLGRGQFRS--------AEEFSREGRKMGPQD-EKHRRLGEKLDQMAQQKNTKATSIAQAYVMHKAPYVFPVIGGRKVEHLKENIEALGLVLSEEEIREIDDAEP 329          
BLAST of CB290446 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.867e-24
Identity = 63/207 (30.43%), Postives = 109/207 (52.66%), Query Frame = -2
Query:  227 TPDYVRSCCEGSLKRLDVDYIDLYFQHRVDTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPIGRGFFAGKAVVE-SLPADSFVASHPRFKEENLEKNKNIYIRIDNLAKKHKCTPAQLALAWILQQGDDVLPIPGTSKIKNLDDNIGSLALKLTKEDLKEI 844
            +PD+++   + SLKRL+ DYIDL++ H  D   P ++ V  L ++ + GKI+ IG+S  S + ++ A+    +  +Q E++L  R+ E+   P  +E  I  +PY P+  G  AGK   + + P          FK E  ++N     ++  +A+KH      + LAW L + +  + IPG  +   L DNI +  + L++ED+  I
Sbjct:   99 SPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFI 305          
The following BLAST results are available for this feature:
BLAST of CB290446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
A115_TOBAC3.709e-7368.21Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE7.184e-5769.28IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO3.055e-5147.30Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO7.077e-3237.87Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YCCK_BACSU1.130e-2934.95Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
PLR2_SCHPO4.018e-2733.33Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
YDJG_ECOLI2.880e-2531.94Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
NORA_ASPFL2.880e-2529.58Norsolorinic acid reductase OS=Aspergillus flavus ... [more]
NORA_ASPPA3.761e-2529.58Norsolorinic acid reductase OS=Aspergillus parasit... [more]
IOLS_BACSU1.867e-2430.43Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01be09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01be09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290446 ID=CB290446; Name=CB290446; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTTTTGATCGAAGTTCACATTTATTCGTCAAACAGATT
AGCAGACATTGTAGCTTGTACATATATTATGGCAATTGTTAATCGCCTAG
TATACACAACATATGAGCTCAGGCCTTGGTGTCTTTCGGAGGTGTGTTCG
CGAGCTTCCATGATACTTTCTTCATACTCTCATAGGTTCTGTCGCCTTCA
ACCTCTTGTATGGGTACAGCATCAGCAATTTCTTTCAAATCCTCTTTTGT
AAGTTTCAGCGCCAAGGACCCTATGTTATCATCCAGGTTCTTAATCTTAC
TTGTTCCAGGGATAGGTAGGACATCGTCTCCTTGTTGGAGAATCCATGCC
AGTGCTAATTGTGCAGGAGTGCATTTGTGCTTTTTGGCAAGGTTATCTAT
GCGGATATAGATGTTCTTATTCTTCTCCAGATTCTCTTCCTTGAACCGAG
GATGTGAAGCCACAAAGCTATCAGCAGGCAAACTTTCCACGACAGCTTTG
CCAGCAAAAAATCCACGACCAATAGGACTGTAAGGAACAATTCCAATGCC
AAGCTCCCTGCAGAGCGGCACTATCTCTTCCTCAATGTCACGAGTCCAGA
GGGACCATTCCATTTGTACAGCTGTGATGGGATGAACTGCATGTGCTCTC
CTAATTGTGTCAGGACTGGCCTCTGATAATCCAATGTACTTGATTTTTCC
CTCCTCAACCAGCTTCTTAAGTTCACCAACTGTGTCTTCTATGGGAACAG
ATGTGTCTACTCTATGCTGAAAATAGAGATCAATGTAGTCCACATCAAGG
CGTTTCAAGCTACCCTCACAACATGATCGCACATAATCAGGGGTACCCTT
CACGAGC
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