CB290473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 4.425e-58 Identity = 114/172 (66.28%), Postives = 134/172 (77.91%), Query Frame = 1 Query: 214 KPTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 KP +L+ EKLG+AG++LL EF +VDC+Y+LSPE+L K++ DALI RSGTKV R+VFE++ GRLKVVGRAGVGIDNVDL AATE GCL RNVAQADAS+KAGKW+R+KYVGVSLVGKTLAV+GFGKVG+EVARRAKGLGM VI+HDPY Sbjct: 82 KPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPY 253
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.772e-33 Identity = 72/169 (42.60%), Postives = 101/169 (59.76%), Query Frame = 1 Query: 223 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 +L+ + L + + +L E V+ A L+ EEL KI D L+ RSGTKV RDV E A +LKV+GRAGVG+DN+D+ AATE G + RN+ QA AS+K G+W R ++ G+ L GKTL V+G G++G +V +RAK GM++I +DPY Sbjct: 4 ILVTDPLHEDAIKILEEVGEVEVATGLTKEELLEKIKDADVLVVRSGTKVTRDVIEK-AEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEWDRKRFKGIELYGKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPY 171
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.023e-31 Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 1 Query: 223 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 VLIA+ + + G+ L E A V ++PEEL I DA++ RS TKV R+V E+ A RLK++ RAGVG+DNVD+ AAT+ G + R +A AD SVK GKW++N+++G+ L GKTL ++G G++GS+V R K GM ++ +DPY Sbjct: 6 VLIADSINEKGISELEEVAEVVVNTTITPEELLDAIKDFDAIVVRSRTKVTREVIEA-APRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDIMVYDPY 173
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28 Identity = 66/170 (38.82%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 223 VLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 VL+AE + + +D + + V+ +S EEL ++ +A++ RS TKV+ +V ++ A LK++GRAGVG+DN+D+ AAT+ G + R + QAD SVK GKW+R K++G+ L GKT V+G G+VG EVA+R K L M+V+A+DP+ Sbjct: 3 VLVAEPISEEAIDYMRKNGLEVEVKTGMSREELIREVPKYEAIVVRSQTKVDAEVIQA-AKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWERKKFMGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPF 171
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.000e-27 Identity = 61/169 (36.09%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 223 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPY 729 VL+++ + Q G+D+L + A VD LS E+ + DA++ RS TKV + ++ + +LK++GRAGVG+DN+D+ AAT G + R++ A+ SVK KW+R +++G + KTL V+G GK+GS VA AK +GM ++A+DP+ Sbjct: 32 VLVSDSIDQVGIDILKQVAQVDVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGS-QLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDANKSVKESKWERKQFIGTEVYKKTLGVVGLGKIGSHVAGVAKAMGMKLLAYDPF 199
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_PONAB (D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.535e-26 Identity = 66/143 (46.15%), Postives = 84/143 (58.74%), Query Frame = 1 Query: 298 NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 NLS EEL ++ C+ LI RS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + LGM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVAIRMQSLGMKTIGYDP 176
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_PANTR (D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 65/143 (45.45%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 298 NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 NLS EEL ++ C+ LI RS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + GM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 65/143 (45.45%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 298 NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 NLS EEL ++ C+ LI RS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + GM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26 Identity = 65/143 (45.45%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 298 NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 NLS EEL ++ C+ LI RS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G++G EVA R + GM I +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CB290473 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.834e-26 Identity = 64/143 (44.76%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 298 NLSPEELCTKISLCDALIGRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 726 NLS EEL ++ C+ LI RS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L GKTL +LG G++G EVA R + GM + +DP Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIGREVAARMQAFGMKTVGYDP 176 The following BLAST results are available for this feature:
BLAST of CB290473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290473 ID=CB290473; Name=CB290473; organism=Citrus sinensis; type=EST; length=731bpback to top |