CB290476

Overview
NameCB290476
Unique NameCB290476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.512e-37
Identity = 89/153 (58.17%), Postives = 96/153 (62.75%), Query Frame = -1
Query:  314 MSLIPSIFGNR--SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIPS FG R  SVFDPFS DVW P        S S E S F S +VDWKETPEAHVFKAD+PGL         +DGRVLQISGER+VEKEDKND W RVE           LPENAK+DQVKASMENGVL              K+I I+G
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.475e-36
Identity = 87/154 (56.49%), Postives = 102/154 (66.23%), Query Frame = -1
Query:  314 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIP IFG+R   S+FDPFS DV+ P       G++S E S FA+ ++DWKETPEAHVFKADLPGL         E+ RVLQISGER++EKEDKNDKW+RVE           LPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36
Identity = 90/154 (58.44%), Postives = 101/154 (65.58%), Query Frame = -1
Query:  314 MSLIPSIFGNR---SVFDPFSSDVWAP---LG---SSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIP IFG+R   SVFDPFS DV+ P   LG   S+S E S FA+ ++DWKETPEAHVFKADLPGL         E+ RVLQISGER+VEKEDKND W RVE           LPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.040e-34
Identity = 88/158 (55.70%), Postives = 95/158 (60.13%), Query Frame = -1
Query:  314 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIPS F  R  +VFDPFS DVW PL            S   E   F S +VDWKETPEAHVFKADLPGL         ED RVLQISGERSVEKEDKND+W RVE           LPENAK+D+VKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.358e-34
Identity = 85/153 (55.56%), Postives = 97/153 (63.40%), Query Frame = -1
Query:  314 MSLIPSIFGNR--SVFDPFSSDVWAPLG------SSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIPSIFG R  +VFDPFS DVW P        S S E S F + +VDWKETPEAHVF+AD+PGL         ED RVLQISGER++EKEDKND W RVE           LPENAK++QVKASMENGVL              K+I+I+G
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.773e-34
Identity = 86/158 (54.43%), Postives = 95/158 (60.13%), Query Frame = -1
Query:  314 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIPS FG R  +VFDPFS DVW P             S   E S F S +VDWKETPEAHVFKADLPG+         ED RVLQISGERSVEKEDKND+W R+E           LPENAK+DQVKA+MENGVL              K+I I+G
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.025e-34
Identity = 84/154 (54.55%), Postives = 95/154 (61.69%), Query Frame = -1
Query:  314 MSLIPSIFGNR--SVFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIP  FG R  +VFDPFS D+W        P  S S E S F S +VDWKETPEAHVFKAD+PGL         ED RVLQISGER+VEKEDKND W RVE           LPENAK+++VKASMENGVL              K+I+I+G
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.025e-34
Identity = 84/154 (54.55%), Postives = 98/154 (63.64%), Query Frame = -1
Query:  314 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIP IFG+R   S+FDPFS DV+ P        ++S E S FA+ ++DWKETPE HVFK DLPGL         E+ RVLQISGER+VEKEDKNDKW R+E           LPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34
Identity = 84/161 (52.17%), Postives = 98/161 (60.87%), Query Frame = -1
Query:  308 MSLIPSIFGNR--SVFDPFSSDVWAPL------------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG*N 748
            MSLIPSIFG R  +VFDPFS D+W P              S++ +V+ F +A+VDWKETPEAHVFKADLPGL         ED  VLQISGERS E E+KNDKW RVE           LPENAK+++VKA+MENGVL              KSI I+G N
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISGAN 161          
BLAST of CB290476 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.150e-33
Identity = 86/161 (53.42%), Postives = 98/161 (60.87%), Query Frame = -1
Query:  314 MSLIPSIFGNR--SVFDPFSSDVWAP---------LGSSS-----NEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 748
            MSLIP+ FG R  +VFDPFS DVW P         L S+S      E S F S +VDWKETPEAHVFKAD+PGL         ED +VLQISGER+VEKEDKND W RVE           LPENAK++QVKASMENGVL              K+I+I+G
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
The following BLAST results are available for this feature:
BLAST of CB290476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
HSP11_SOYBN6.512e-3758.1717.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOLPE2.475e-3656.4917.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP12_SOLPE9.404e-3658.4417.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_PEA1.040e-3455.7018.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP13_SOYBN1.358e-3455.5617.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA1.773e-3454.4318.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP14_SOYBN3.025e-3454.5517.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOLLC3.025e-3454.5517.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS181_ARATH6.739e-3452.1718.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP16_SOYBN1.150e-3353.4218.5 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01bg04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bg04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290476 ID=CB290476; Name=CB290476; organism=Citrus sinensis; type=EST; length=796bp
TTTTTTTTTTTTACAGATTGTAAGGCTCACCACCATACATCTTCCGTTGA
GAGCTTGCCACAAGCACTATCACAATATTTGGACAACCAAAATATTGGCT
AAGTCCCCGGTTACATGAATTAATAATTAATATATTTCTCCTTCCAAGAA
AACAACATATTTTTATTACTTAAAATTACTTAAAAAAGCAGTCGACAACA
CATTACATGAACAAAAGTATGCGACACACTTAACAGCAATCGCACATCGT
TCATTAACACACAGAACAAAACAAGAACCAAATTAAAAAGGCTGCAATTA
ACGGAGAGTTTCAACCAGTGATCTGAATGGATTTGACCTCAGGCTTCTTC
TCCTCCACTTTGGGAACAGTGACGGTGAGGACACCATTCTCCATTGATGC
CTTAACTTGATCGATCTTGGCATTCTCAGGCAACCGGAACCTCCTCAGGA
ACTTGCCGCGGCCCCTCTCAACACGCCGCCATTTGTCGTTCTTGTCTTCC
TTCTCGACGCTCCTCTCACCGCTGATCTGAAGGACTCTCCCGTCCTCAAC
TTCAACCTTCACTTCCTCTTTCTTGAGCCCCGGAAGATCCGCCTTGAAAA
CATGAGCTTCCGGGGTTTCTTTCCAATCGACTTGAGCACTGGCAAATGTT
GACACCTCATTGCTGGAGGAGCCAAGGGGCGCCCAAACGTCCGAGGAAAA
TGGGTCGAACACGCTCCTGTTTCCGAATATAGATGGAATCAAAGACATTT
TTGCTTAATCAAAGCGACGAGCACTTTCTTCGAAATCGTCCTCGTG
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