CB290480

Overview
NameCB290480
Unique NameCB290480
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB290480 vs. ExPASy Swiss-Prot
Match: YCF19_GUITH (Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.508e-13
Identity = 33/86 (38.37%), Postives = 56/86 (65.12%), Query Frame = -1 
Query:  230 LNTPLTVVAAGLAKWLDIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLAQILT 487
            ++   T++ +    +L IY  +LL+RV L+WFPN+ W  QP  ++  + DPYL +FR I+PP+   +D+SP+L F +L  + QI++
Sbjct:    1 MSNSFTLLFSSFIGFLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG-IDISPILGFILLQCIMQIVS 85
The following BLAST results are available for this feature:
BLAST of CB290480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCF19_GUITH8.508e-1338.37Uncharacterized protein ycf19 OS=Guillardia theta ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01bg06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bg06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290480 ID=CB290480; Name=CB290480; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCAAACATTAATTGGAAATTCCCAAGATCCCCCT
ACAGGAAATGCAAAACACTACGAGCAACTCAAATGTAAAATTCAAACATG
GCACTAAGTATCAAAATGTGACAATACCACATTAGAAACTGGCACGTACA
TCCAACAATCAAAACTGTATCAATATTTGAGAACTCAATATTCACTATTA
ATGACACTTACTCACGCTCCCCGACTGAAAGTAAGTATCTGGGCGAGTGT
TCCCAAAACGGCGAAAGCTAACAAGGGGCTGACATCCAGTGTATCGAAAA
CAGGGGGGATAATATTCCGAAAGAGATTCAAATAAGGATCACACAAGTCC
CGAATGGCCGAAAGCGGCTGCCTTTCCCAAGGAATGTTGGGGAACCAACT
CAGCAAAACCCTAACCAACAAAACCCCACTGTAAATGTCAAGCCACTTGG
CCAATCCCGCCGCCACAACCGTGAGCGGCGTGTTCAAGCTCCCGCTAGGG
CGCTCACGGAGAGCCGCGAAGAACAAGGGCCCCACAGACTGAACCAAATT
GGTTGTTGGTTGTGGGAGGGTTGGGATTTTGGAGATGGCGAATTTGAGGA
GAAATCCGGAGAGAGATAGGAGGGTGGTGACGGTGCGAGTTGAGTCGTTG
AGCAGAGGGGAGAGAGGTGTGATTTTGGGGGTCTTGAGGGGTAAAGTTGG
GAGAGATGAGGATGACGATGTGGCTGCGGCTTTGATGGGCAGGAAAGAGG
GGGAGGCACGGCAGGGAGATTGGTGGAGGGTTTTAGGGTTTGA
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